Gene Tfu_1268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1268 
Symbol 
ID3580514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp1472705 
End bp1473373 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content65% 
IMG OID637684965 
Productputative secreted cellulose-binding protein 
Protein accessionYP_289329 
Protein GI72161672 
COG category[S] Function unknown 
COG ID[COG3397] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.459217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCGTT ACTCTCGTAC CGGGAAACAC CGGTGGACAG TACGGGCTCT CGCGGTCCTC 
TTCACAGCCC TTCTCGGGCT GACCCAGTGG ACCGCCCCCG CGTCCGCCCA CGGGTCGGTC 
ATCAACCCCG CGACCCGTAA CTACGGTTGC TGGCTGCGTT GGGGCCACGA CCACCTCAAC 
CCCAACATGC AGTACGAAGA CCCCATGTGC TGGCAGGCCT GGCAGGACAA CCCCAACGCC 
ATGTGGAACT GGAACGGCCT GTACCGCGAC TGGGTCGGCG GCAACCACCG GGCTGCCCTC 
CCCGACGGCC AGCTGTGCAG CGGTGGCCTC ACCGAAGGCG GCCGCTACCG CTCCATGGAC 
GCCGTAGGCC CGTGGAAGAC CACCGACGTC AACAACACCT TCACCATCCA CCTGTACGAC 
CAGGCCAGCC ACGGCGCAGA CTACTTCCTG GTCTACGTCA CCAAGCAGGG CTTCGACCCG 
ACCACCCAGC CGCTGACCTG GGACAGCCTG GAACTGGTGC ACCAGACCGG CAGCTACCCC 
CCGGCCCAGA ACATCCAGTT CACGGTCCAC GCCCCCAACC GCAGCGGCCG CCACGTGGTC 
TTCACCATCT GGAAGGCCTC GCACATGGAC CAGACCTACT ACCTGTGCAG CGACGTGAAC 
TTCGTCTGA
 
Protein sequence
MHRYSRTGKH RWTVRALAVL FTALLGLTQW TAPASAHGSV INPATRNYGC WLRWGHDHLN 
PNMQYEDPMC WQAWQDNPNA MWNWNGLYRD WVGGNHRAAL PDGQLCSGGL TEGGRYRSMD 
AVGPWKTTDV NNTFTIHLYD QASHGADYFL VYVTKQGFDP TTQPLTWDSL ELVHQTGSYP 
PAQNIQFTVH APNRSGRHVV FTIWKASHMD QTYYLCSDVN FV