| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1266 |
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| Symbol | |
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| ID | 3580512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1470793 |
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| End bp | 1471695 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637684963 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_289327 |
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| Protein GI | 72161670 |
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| COG category | [K] Transcription
[S] Function unknown |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins
[COG3708] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.23796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACAGC AGAGGAAGGA GATCCAGGTG CTGGACCGGC TCAACCAGGC CATGGAGTAC
ATCGAGCGCC ACCTCGACCA GCGGATCGAG GGTGCTGAGC TGGCGCAGAT CGCGGCCACG
TCGGAGTACC ACATGCGGCG GCTCTTTTCT GCACTGGCGG GGATGCCGCT GTCGGAGTAC
ATCCGACGGC GGCGGCTCAC CGTTGCCGGA GCCGAAGTGC TGGCGGGGGA CCGCACCCTG
CTCGACATTG CCGTGCGCTA CGGCTACGGC TCGGCGGAGG CGTTTGCGCG GGCGTTCCGC
GCCATGCACG GGGTAGGGCC GGGGGAGGCC CGGCGCACCG GTGCGCCTTT GCGCTCCCAA
CCTCGGATGT CCTTCCGGCT CGTCGTTGAA GGGAGCACAG ACATGCGATA CCGGATTGTG
GAGAAGGACG CTTTCCAGGT GGTTGGGAAG AAGGCGCGCG TGCCTCTCGT CTATGAGGGG
CCTAACCCGG CCATCGTCGA GTTTGTGCGG AGTATCGACC CTGGGACACT GCAGCGGCTG
GCGGAACTGT CCGATCAGGA GCCGCGGGGA GTGGTCGCAG CTGTTGCCAA CATCGCCGGT
GAGCGGGTGA GCGCACCGGA AGGCACCGAA CTGGACTACT ACCACGGGGT GGTCACTAGT
GCGCCAGCAC CCGAGGACAT GGCGGTGCTG CCCGTGGCGG CAGGGCTGTG GGCGGTGTTC
GAAGTGGAGG GAGAGGCGCC GTACGCCATC CAATACCTGT GGCGGGACGT GTTCACCCAG
TGGTTTCCCG CCAACCCCTA CCAGAGTGTG CCGGGGCCGG AACTGTTGCG CACCACGATG
TCGCAGGACG GAGCCTATGT AGAAGCCGAA CTGTGGGTCC CGGTGGAGCG GGTCGAACGG
TGA
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| Protein sequence | MKQQRKEIQV LDRLNQAMEY IERHLDQRIE GAELAQIAAT SEYHMRRLFS ALAGMPLSEY
IRRRRLTVAG AEVLAGDRTL LDIAVRYGYG SAEAFARAFR AMHGVGPGEA RRTGAPLRSQ
PRMSFRLVVE GSTDMRYRIV EKDAFQVVGK KARVPLVYEG PNPAIVEFVR SIDPGTLQRL
AELSDQEPRG VVAAVANIAG ERVSAPEGTE LDYYHGVVTS APAPEDMAVL PVAAGLWAVF
EVEGEAPYAI QYLWRDVFTQ WFPANPYQSV PGPELLRTTM SQDGAYVEAE LWVPVERVER
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