Gene Tfu_1262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1262 
Symbol 
ID3580508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand+ 
Start bp1466042 
End bp1466743 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content62% 
IMG OID637684959 
Producthypothetical protein 
Protein accessionYP_289323 
Protein GI72161666 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.683399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGGA GGTATGAGGG GAAGATCGTG AAAGAGGCAG AGTCGCATGC GCTCACCGAG 
GAATTCTTGA TCCGACCGCC ACGTCAGGAG CGGAGCCGTC GAGCGTGGGC GCGGGTGCTG 
GAGGCCGGTG CTTCCCTGTT CGAAGAAGGC GGGTATGAGG CGTTCACCAT TGCGGCTGTC 
TGTGAGCGCG CTAAGGTTGC CCCTCGGGCT ATCTACGACC GCACTCCCAG CAAGGATGCG 
CTTCTCGTTG CTGTCTACGA GTACTGGGTG AACCGGGTCT GGGAGGAGAT GCGGATTTTT 
GACGACGAGG AGCAGTGGAT CGGTCTTGAC GGTCCTGAAC TAGTCACACG GCTCTTCACG 
GAGCTCGGCA GCATCCTTCG TCGCCACGAG TCCTTCACCC GGTCACTCAT GGCTCTTTCA 
CCCACTACCC ACGACAGGAT CTACCGGCGG GTCCAGTGGT ACAACAGGCA GCTCATCGAC 
CGGCTCACCA ACCTGTTGCT GCTGGCAAAA CCGCAGATCA CGCACAGTGA TCCGGAGACA 
GCGGTGCAGA TGTGCCTGAT TGCTGTCTAC TCCGCGCTGA TCGTGCACGT CGGGTGCGGC 
GCAGTGCTGG CGCCGGCTTC TCTCGACCGT GACGATTTCA ACCGGCATCT CGCGGAGATG 
GCGCTGCGCT ACCTGCTGGG AGCGGAGCCG CAAGCAGCGT GA
 
Protein sequence
MTRRYEGKIV KEAESHALTE EFLIRPPRQE RSRRAWARVL EAGASLFEEG GYEAFTIAAV 
CERAKVAPRA IYDRTPSKDA LLVAVYEYWV NRVWEEMRIF DDEEQWIGLD GPELVTRLFT 
ELGSILRRHE SFTRSLMALS PTTHDRIYRR VQWYNRQLID RLTNLLLLAK PQITHSDPET 
AVQMCLIAVY SALIVHVGCG AVLAPASLDR DDFNRHLAEM ALRYLLGAEP QAA