Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1232 |
Symbol | |
ID | 3580995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 1435123 |
End bp | 1435779 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637684928 |
Product | TetR family transcriptional regulator |
Protein accession | YP_289293 |
Protein GI | 72161636 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGGCC AGGTGTCATG GGACCACGAT CCCCTTGCTT CACCGGACTC ACCTGACAAG CGCCCGTGGA CGGCCAAAGG GCTGCGCGCC CGGCGGCGGA TCCTGGCCGC GGCGCGGAAG TGTTTCGCCG AGGTCGGCTA CGAGAAGGCG ACACTCCGCA TGATCGCCGC GGAGGCGAAC TCCGACAAAT CCTCGGTCAT CAAGTATTTC GGCAGCAAAG AGCAGCTTTT CCGCGAATGC GTGTACTGGA CGATCCCCAT CGACGAACTC ACCGCGGACG CCCCCGACCA GTCTGCCGAG AACTATTTGC GTTCCATGCT CTCCGCTTGG GCGAGGGACC CCCACAGTCC CATGGCGGTG CTGCTGCGGG TGAGCATGAC CAACAAGGAG GCGGCTGACC TGCTGCGCTC GCATATCACC ACGCATTCCG TGGAACGGGT GATGAAGCAC ATGAAAGGAC CCGACCCTGA GCTGCGGGCC GGACTCTTCG CCGCCATGAT GATGGGAATC GCCAGCGGCC GCTATCTGCT GCGCATTCCC GGCCTGGCCG AAGCGGAACT GGACGATGTG CTCCGAGTGG CTGCTCCCGC TATCCGTGCC CTCATCGCCG TCGAGGAGGG CACAGACAGC ACAGAAGAAA AGCAGGACAG AACTTGA
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Protein sequence | MTGQVSWDHD PLASPDSPDK RPWTAKGLRA RRRILAAARK CFAEVGYEKA TLRMIAAEAN SDKSSVIKYF GSKEQLFREC VYWTIPIDEL TADAPDQSAE NYLRSMLSAW ARDPHSPMAV LLRVSMTNKE AADLLRSHIT THSVERVMKH MKGPDPELRA GLFAAMMMGI ASGRYLLRIP GLAEAELDDV LRVAAPAIRA LIAVEEGTDS TEEKQDRT
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