Gene Tfu_1232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1232 
Symbol 
ID3580995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1435123 
End bp1435779 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content63% 
IMG OID637684928 
ProductTetR family transcriptional regulator 
Protein accessionYP_289293 
Protein GI72161636 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGGCC AGGTGTCATG GGACCACGAT CCCCTTGCTT CACCGGACTC ACCTGACAAG 
CGCCCGTGGA CGGCCAAAGG GCTGCGCGCC CGGCGGCGGA TCCTGGCCGC GGCGCGGAAG
TGTTTCGCCG AGGTCGGCTA CGAGAAGGCG ACACTCCGCA TGATCGCCGC GGAGGCGAAC
TCCGACAAAT CCTCGGTCAT CAAGTATTTC GGCAGCAAAG AGCAGCTTTT CCGCGAATGC
GTGTACTGGA CGATCCCCAT CGACGAACTC ACCGCGGACG CCCCCGACCA GTCTGCCGAG
AACTATTTGC GTTCCATGCT CTCCGCTTGG GCGAGGGACC CCCACAGTCC CATGGCGGTG
CTGCTGCGGG TGAGCATGAC CAACAAGGAG GCGGCTGACC TGCTGCGCTC GCATATCACC
ACGCATTCCG TGGAACGGGT GATGAAGCAC ATGAAAGGAC CCGACCCTGA GCTGCGGGCC
GGACTCTTCG CCGCCATGAT GATGGGAATC GCCAGCGGCC GCTATCTGCT GCGCATTCCC
GGCCTGGCCG AAGCGGAACT GGACGATGTG CTCCGAGTGG CTGCTCCCGC TATCCGTGCC
CTCATCGCCG TCGAGGAGGG CACAGACAGC ACAGAAGAAA AGCAGGACAG AACTTGA
 
Protein sequence
MTGQVSWDHD PLASPDSPDK RPWTAKGLRA RRRILAAARK CFAEVGYEKA TLRMIAAEAN 
SDKSSVIKYF GSKEQLFREC VYWTIPIDEL TADAPDQSAE NYLRSMLSAW ARDPHSPMAV
LLRVSMTNKE AADLLRSHIT THSVERVMKH MKGPDPELRA GLFAAMMMGI ASGRYLLRIP
GLAEAELDDV LRVAAPAIRA LIAVEEGTDS TEEKQDRT