| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1215 |
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| Symbol | |
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| ID | 3580706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1417529 |
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| End bp | 1419088 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637684911 |
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| Product | methylmalonyl-CoA decarboxylase alpha chain |
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| Protein accession | YP_289276 |
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| Protein GI | 72161619 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.336846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGCGG AATCTTATTT TCAGAAACTC GTGGACGACC TTGCAGCGGT CCGGTCCACC
GTCGTGGCAG GAGACCCCAG AGCCACAGAA CGCCAGCGCT CTCTTGGGAA ACTGACCGTA
CGGGAGCGGA TCGACCTCCT GCTCGATAAA GACTCGTTCC ACGAGATCGG ATCTTTCCGG
CGGCACCGTT CCGTGGGGTT CGGAATAGAG AACAAAAGAC CGCACACCGA CGGAGTCGTC
ACGGGATGGG GACGCGTCTA CGGGAGAAAA GTTTTCGTCT ACGCGCACGA CTTCCGGATT
TTCGGCGGAT CTCTCGGAGA AGCGCACGCA GAAAAGATCC AAAAAATCAT GGACCTCGCC
TACGAGGCCG GCGCACCCGT GGTCGGGCTC AACGACGGGG CAGGGGCACG GATCCAGGAA
GGAGTGGGGG CCCTCGCCGG ATACGGCGGG ATCTTCTCCC GCAACGTCCG CGCCTCAGGC
GTCATCCCCC AGATCAGCGT CATCCTAGGG CCCTGCGCGG GAGGCGCCGC CTACTCGCCG
GCCCTCACCG ACTTCGTCTT CATGGTCCGC GGCATCGCGC AAATGTTCGT GACCGGGCCC
GACGTGGTCC GTGCCGTCAC CGGCGAAGAA ATCACCCAAG AGGAACTCGG CGGTGCCGAC
ACCCACAGCA GCGTGTCCGG AGTCGCGCAC TTCGCCTACG ACAACGAGCA CGCCTGCCTC
ACCGACGTGC GCTACCTGCT GAGCCTCCTC CCCAGCAACA ACCGGGAACT GCCACCCCAC
CTGCCCACCG ACGACCCGCC CGACCGCCCC TGCACCCGGA TCAGCAGCAT CGTGCCCCCC
GACCCCGCCA AGCCCTACGA CGTTCGCGAC GTCATCGCCG ACATCGTCGA CGAGGGCGAC
TTCTTCGAAG TCCACGAGGC ATGGGCCCCC AACATCGTGT GCGCTCTCGC CAGGCTCGAC
GGGCATGTGG TCGGTGTCGT CGCCAACCAG CCGACCCACC TCGCCGGCGT GCTCGACATC
CACGCCAGCG AGAAAGCGGC ACGGTTCGTC CAATTCTGCG ACGCCTTCAA CATCCCCCTC
GTCACCCTCG TGGACGTTCC CGGGTTCATG CCGGGCACCG CTCAAGAGCA CGGAGGCATC
ATCCGGCACG GCGCCAAACT CCTCTACTCC TACTGCAACG CGACAGTGCC CCGCGTCCAA
GTCGTCATGC GGAAGTCCTA CGGCGGCGCC CACATCGTCA TGGACTCCCT CTCCATCGGA
TCCGACATCT CCCTGGCCTG GCCCACCAAC GAGATCGCGG TGATGGGCGC TGAAGGCGCA
GCCAACGTGG TCTTCCGCAA AGAAATCGCC GCAGCAGAGG ACCCCGACGC CGTCCGGGCC
CGCAAGATCG CCCAATACCG CGAAGAACTC ATGCACCCCC ACTACGCGGC AGAACGCGGC
TTCGTTGACG AGCTCATCGA CCCCGCCCAC ACCCGGGCGG CACTCATCAG CGCACTCGCC
GCCCTCCGCG GCAAACACGC CGAACGCCCC GACCGGAAAC ACGGCAACCA GCCCACCTAA
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| Protein sequence | MGAESYFQKL VDDLAAVRST VVAGDPRATE RQRSLGKLTV RERIDLLLDK DSFHEIGSFR
RHRSVGFGIE NKRPHTDGVV TGWGRVYGRK VFVYAHDFRI FGGSLGEAHA EKIQKIMDLA
YEAGAPVVGL NDGAGARIQE GVGALAGYGG IFSRNVRASG VIPQISVILG PCAGGAAYSP
ALTDFVFMVR GIAQMFVTGP DVVRAVTGEE ITQEELGGAD THSSVSGVAH FAYDNEHACL
TDVRYLLSLL PSNNRELPPH LPTDDPPDRP CTRISSIVPP DPAKPYDVRD VIADIVDEGD
FFEVHEAWAP NIVCALARLD GHVVGVVANQ PTHLAGVLDI HASEKAARFV QFCDAFNIPL
VTLVDVPGFM PGTAQEHGGI IRHGAKLLYS YCNATVPRVQ VVMRKSYGGA HIVMDSLSIG
SDISLAWPTN EIAVMGAEGA ANVVFRKEIA AAEDPDAVRA RKIAQYREEL MHPHYAAERG
FVDELIDPAH TRAALISALA ALRGKHAERP DRKHGNQPT
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