Gene Tfu_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1214 
Symbol 
ID3580705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1416342 
End bp1417124 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID637684910 
Productmolecular chaperone (small heat shock protein) 
Protein accessionYP_289275 
Protein GI72161618 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.318766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGGG TGAGAGGCCC GTTCGTCCTG GTTGATGGGC GCGGCCCAGC GGTAGTTCTG 
CGAATGCACC TGCACGGGCA GGGGCGTGGT CGACTGCGCG GTGCGCGGCG CGTCGGTGGG
GTGCTGTCGA CCAGCCGACT CCAGCTGGGC TTGGTGGGGA GACCCGCCCC TCCCCCACCA
GTGACACGCA ACACACTCAA CAAAGTTGAG TTTATGGGAC TCAAATTTGG GGATGATCAC
CGGCGCAAGG CCGCAAGGCC TCCGCACCTG AACCCACCGC CTCCCGGCGG TCACCAACGA
GTTCGAGGAG GTACAGACAT GGCACTGCCC GTCGTCCGTT CTTCTCAGCC GACAACCGGA
TGGGACCCGT TTCGGGAGCT GAACGAACTC CACACGCAGC TGCATCGGTG GATGGATTCG
GTGCTGGAGC GGACTTCCGG CCTCACCGCG GACCCGTTGA GCTGGTCGCC GCTGGCTGAC
CTGTCCGAGA CCGAGGACGC CTACCTGGTC GAGGTGGAAG TCCCGGGTGT CTCCCGCGAG
GACATCAGCA TCGACCTGTC CGGGACGGAA CTGGTGATCA CGGGAGAACG CAAGGAGCGG
GAGCGCGAGG GCTGGTTCCG CCACCGCACC CGCAGCGTCG GCCGGTTCCA CTACGCGGTC
ACCCTGCCGC GGGACATCGA CCCTGACGGG GTGGACGCGA CCTTGTCCCA GGGGGTTTTG
ACCGTGCGGA TCCCCAAGAG CAAGGCGCTC AAGCCGCGGC GGATCGCCAT TACCGAGCGG
TAA
 
Protein sequence
MARVRGPFVL VDGRGPAVVL RMHLHGQGRG RLRGARRVGG VLSTSRLQLG LVGRPAPPPP 
VTRNTLNKVE FMGLKFGDDH RRKAARPPHL NPPPPGGHQR VRGGTDMALP VVRSSQPTTG
WDPFRELNEL HTQLHRWMDS VLERTSGLTA DPLSWSPLAD LSETEDAYLV EVEVPGVSRE
DISIDLSGTE LVITGERKER EREGWFRHRT RSVGRFHYAV TLPRDIDPDG VDATLSQGVL
TVRIPKSKAL KPRRIAITER