Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1214 |
Symbol | |
ID | 3580705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 1416342 |
End bp | 1417124 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637684910 |
Product | molecular chaperone (small heat shock protein) |
Protein accession | YP_289275 |
Protein GI | 72161618 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.318766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGGG TGAGAGGCCC GTTCGTCCTG GTTGATGGGC GCGGCCCAGC GGTAGTTCTG CGAATGCACC TGCACGGGCA GGGGCGTGGT CGACTGCGCG GTGCGCGGCG CGTCGGTGGG GTGCTGTCGA CCAGCCGACT CCAGCTGGGC TTGGTGGGGA GACCCGCCCC TCCCCCACCA GTGACACGCA ACACACTCAA CAAAGTTGAG TTTATGGGAC TCAAATTTGG GGATGATCAC CGGCGCAAGG CCGCAAGGCC TCCGCACCTG AACCCACCGC CTCCCGGCGG TCACCAACGA GTTCGAGGAG GTACAGACAT GGCACTGCCC GTCGTCCGTT CTTCTCAGCC GACAACCGGA TGGGACCCGT TTCGGGAGCT GAACGAACTC CACACGCAGC TGCATCGGTG GATGGATTCG GTGCTGGAGC GGACTTCCGG CCTCACCGCG GACCCGTTGA GCTGGTCGCC GCTGGCTGAC CTGTCCGAGA CCGAGGACGC CTACCTGGTC GAGGTGGAAG TCCCGGGTGT CTCCCGCGAG GACATCAGCA TCGACCTGTC CGGGACGGAA CTGGTGATCA CGGGAGAACG CAAGGAGCGG GAGCGCGAGG GCTGGTTCCG CCACCGCACC CGCAGCGTCG GCCGGTTCCA CTACGCGGTC ACCCTGCCGC GGGACATCGA CCCTGACGGG GTGGACGCGA CCTTGTCCCA GGGGGTTTTG ACCGTGCGGA TCCCCAAGAG CAAGGCGCTC AAGCCGCGGC GGATCGCCAT TACCGAGCGG TAA
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Protein sequence | MARVRGPFVL VDGRGPAVVL RMHLHGQGRG RLRGARRVGG VLSTSRLQLG LVGRPAPPPP VTRNTLNKVE FMGLKFGDDH RRKAARPPHL NPPPPGGHQR VRGGTDMALP VVRSSQPTTG WDPFRELNEL HTQLHRWMDS VLERTSGLTA DPLSWSPLAD LSETEDAYLV EVEVPGVSRE DISIDLSGTE LVITGERKER EREGWFRHRT RSVGRFHYAV TLPRDIDPDG VDATLSQGVL TVRIPKSKAL KPRRIAITER
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