| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1200 |
|---|
| Symbol | |
|---|
| ID | 3580143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 1402894 |
|---|
| End bp | 1403517 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637684896 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_289261 |
|---|
| Protein GI | 72161604 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.552549 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGACG ACACCGGGAT CGTCGACACC CCCGACTCCT GGCCGGTCGA ACGCTCGGAG
ACGCGGTACC GCAGCCCCAT CGTCGGCATG GTCACCGACT GGGTGCGTAT GCCCGGCCGG
GACGGTGAGG AGACCGTGGC CCGGGACCGC TTCGTCCACC CTGGAGCGGT CGCGGCCCTG
GCCCTCGACG ACGCCGGGCG GGTGCTGCTG CTCCGCCAGT ACCGGCACGC GGTCCAGCAC
CGGCTGTGGG AGCTGCCCGC CGGGATCCGC GACGTTGACG GGGAGCCCCC GTTGCGTACC
GCGCAACGGG AACTGCTGGA AGAAGCCGGA TACCGGGCGG CCACGTGGCA CGAGCTTGCC
GACTTCTTCC CTTCCGCAGG GTTTTCCACG GAACGCATCC ACGTCTTCCT CGCCCGTGAC
CTCGTCCGCG TCCCCGAGGA GGAAGTGGAC TTTGTCCGCA TCCACGAGGA AGCGGACATG
CCCATCGAAT GGGTTCCGCT GGACGAGGCG GTCGCCGCAG TGCTCGCGGG ACGGCTGCAC
AACGCCGCCA CCGTCATCGG GATTCTCGCC GCCCACGCGG CGTCCCGCGA CGGTTTCGCG
TCCCTGCGCC CCGCGGTCGA ATAA
|
|---|
| Protein sequence | MGDDTGIVDT PDSWPVERSE TRYRSPIVGM VTDWVRMPGR DGEETVARDR FVHPGAVAAL
ALDDAGRVLL LRQYRHAVQH RLWELPAGIR DVDGEPPLRT AQRELLEEAG YRAATWHELA
DFFPSAGFST ERIHVFLARD LVRVPEEEVD FVRIHEEADM PIEWVPLDEA VAAVLAGRLH
NAATVIGILA AHAASRDGFA SLRPAVE
|
|---|
| |