| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1191 |
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| Symbol | rpsA |
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| ID | 3580454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1389156 |
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| End bp | 1390613 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637684887 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_289252 |
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| Protein GI | 72161595 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00406916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAGCA GCACCGAGGC CACCTCGACA CCGCAGGTAG CGGTCAACGA CATCGGTTCC
GAGGAAGCCT TCCTCGCCGC GATCGACGAG ACCATCAAGT ACTTCAACGA CGGTGACATC
GTCGAAGGCA CCATCGTGAA GGTCGATCGA GACGAGGTCT TGCTCGACAT CGGCTACAAG
ACCGAGGGTG TGATCCCCTC ACGTGAACTC TCGATCAAGC ACGACGTCGA TCCACACGAG
GTCGTCGCTG TCGGGGACCA TGTCGAAGCT CTTGTTCTCC AGAAGGAGGA CAAGGAAGGC
CGCCTCATCC TGTCCAAGAA GCGCGCTCAG TACGAGCGGG CTTGGGGCAC GATCGAAAAG
ATCAAGGAAG AGGACGGCGT CGTCACCGGC ACCGTTATCG AGGTTGTCAA GGGCGGTCTC
ATCCTCGACA TTGGCCTTCG CGGCTTCCTG CCCGCTTCCC TCGTCGAGAT GCGTCGCGTG
CGCGACCTGC AGCCCTACGT GGGCCGCGAG CTCGAAGCCA AGATCATCGA GCTTGACAAG
AACCGCAACA ACGTCGTCCT GTCGCGCCGT GCCTGGCTGG AACAGACCCA GTCCGAGGTC
CGCCAGACCT TCCTCAACAC CCTGCAGAAG GGCCAGATCC GTAAGGGTGT GGTCTCTTCG
ATCGTCAACT TCGGCGCGTT CGTCGACCTC GGCGGTGTTG ATGGTCTGGT GCACGTGTCC
GAACTGTCCT GGAAGCACAT CGACCACCCG AGCGAAGTGG TCGAGGTCGG CCAGGAGGTC
ACGGTCGAGG TCCTCGATGT CGACATGGAG CGCGAGCGCG TCTCCCTGTC GCTGAAGGCC
ACCCAGGAAG ACCCGTGGCA GCAGTTCGCC CGCACCCACC AGATCGGACA GATTGTTCCG
GGTAAGGTCA CCAAGCTGGT GCCGTTCGGC GCGTTCGTGC GGGTCGAAGA GGGTATCGAG
GGTCTGGTGC ACATCTCCGA GCTGGCCGAG CGCCACGTGG AGGTCCCCGA ACAGGTTGTT
CAGGTGGGCA CCGAGATCTT CGTCAAGATC ATCGACATCG ACCTGGACCG GCGCCGCATC
AGCCTGTCGC TGAAGCAGGC CAACGAGAGC ATCTCGCCGG ACCAGACCGA GTTCGACCCG
ACGATGTACG GCATGGTTGC CGAGTACGAC GAACACGGCA ACTACAAGTA CCCGGAGGGC
TTCGACCCGG AGACCGGCGA GTGGATGGAG GGCTACGAGG CCCAGCGCGA CGAGTGGGAG
CGCCAGTACG CTCTGGCTCA GGCCCGCTTC GAAGCGCACC GCAAGCAGGT CCAAGAAGCC
CAGGCTGCCG AGGCCGCGGC TGCTCAGGAG CAGCAGGCCG ACGACGACAG CGGTTCTGGT
CAGGGCGGCG GAGAGCTCGC CTCCGACGAG GCCCTGGCCG CGCTGCGGGA GAAGCTCGCG
GGCGGCGGCG AAAGCTGA
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| Protein sequence | MTSSTEATST PQVAVNDIGS EEAFLAAIDE TIKYFNDGDI VEGTIVKVDR DEVLLDIGYK
TEGVIPSREL SIKHDVDPHE VVAVGDHVEA LVLQKEDKEG RLILSKKRAQ YERAWGTIEK
IKEEDGVVTG TVIEVVKGGL ILDIGLRGFL PASLVEMRRV RDLQPYVGRE LEAKIIELDK
NRNNVVLSRR AWLEQTQSEV RQTFLNTLQK GQIRKGVVSS IVNFGAFVDL GGVDGLVHVS
ELSWKHIDHP SEVVEVGQEV TVEVLDVDME RERVSLSLKA TQEDPWQQFA RTHQIGQIVP
GKVTKLVPFG AFVRVEEGIE GLVHISELAE RHVEVPEQVV QVGTEIFVKI IDIDLDRRRI
SLSLKQANES ISPDQTEFDP TMYGMVAEYD EHGNYKYPEG FDPETGEWME GYEAQRDEWE
RQYALAQARF EAHRKQVQEA QAAEAAAAQE QQADDDSGSG QGGGELASDE ALAALREKLA
GGGES
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