Gene Tfu_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1190 
Symbol 
ID3580453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1388318 
End bp1388746 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content69% 
IMG OID637684886 
Productpeptidyl-tRNA hydrolase domain protein 
Protein accessionYP_289251 
Protein GI72161594 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0102787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACGGA ATCCACTCGG CGCCCCTCGC GTGGAGCTGC GCGACGACGA ACTGGTGTGG 
CGTTTCTCTC GTTCCTCGGG TCCGGGTGGG CAGCACGCCA ATACTGCGAG CACGCGGGTC
TCGCTGTCCC TGGACGTCAC CACCACCGCG GTGCTCACCG AGGAACAGCG GGAGCGCGTC
CTGCGGCGCC TGGGCCCGCG GCTGGTTGAC GGGGTGCTGA CCGTTTCAGC ACAAGATTTT
CGCTCCCAGG CCCGCAACCG GGAAGTCGCC TGGGAGCGCC TGGCGGCGCT GCTCAGCGAG
GCAGCTCGGC CTCCAGCGCG GAAAAGACGG CCTACCAAGC TGTCCCGGGC GGCCAAGGAG
CGCCGGCTGC GGGAGAAGCG ACACCGCTCC GCTCTCAAAC GCCTCCGTTC GGGGCGCTAC
GAGGAGTAG
 
Protein sequence
MRRNPLGAPR VELRDDELVW RFSRSSGPGG QHANTASTRV SLSLDVTTTA VLTEEQRERV 
LRRLGPRLVD GVLTVSAQDF RSQARNREVA WERLAALLSE AARPPARKRR PTKLSRAAKE
RRLREKRHRS ALKRLRSGRY EE