| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1186 |
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| Symbol | |
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| ID | 3580449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1382490 |
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| End bp | 1383737 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637684882 |
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| Product | branched-chain amino acid transport system substrate-binding protein |
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| Protein accession | YP_289247 |
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| Protein GI | 72161590 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.62825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCACA CAAAGGCACT GGGCTTCACT GCCGCGGTCG CGGCGCTGGC CTTGGGACTC
ACCGCATGCG GCGCTGGCGG TAACGACGAC AACGGCGGAA GCGGAGGCGA CGGGGACGGC
CTGCAGTTCG GCTACATCTT CCCCGAGAGC GGCGACCTGG CTTTCCTCGG ACCGCCGCAG
ATCAGCGCAG CCGAGTACGC GATCCAGGAG ATCAACGACG CCGGCGGTGT GCTGGGCACC
GAGCTCCCCA AGCTCATCGG TGGTGACGAA GCCGGCGACG CGGCCCAGGC CAACGAGACC
GCTAACCGCC TCCTCGACCA GGGGGTGGAC GCCATCCTGG GTGCTGCCGC TTCCGGTATG
ACCAAGGCGG TCATCGACTC CATTACCGGT GCGGAGGTGG TGCAGTGCTC CGGCTCCAAC
ACCGCTCCTG ACCTCACCGA CTACCCCGAC GGCGGCTACT ACTTCCGTAC CGCGCCCAGC
GACCTGATGC AGGGCCCGGT GCTCGCCGAG ACCATCCTCG CCGACGGCCA CCAGAGCGTC
GCCATCATCT ACCGGGCCGA CGACTACGGT GAAGGCCTGG CGAACTCGGT GAGCGAAGCT
TTGGAGGCCA GCGGCGCGGA GGTCACCGCC AAGGAGAGCT ACGACCCCAA CGCCACCAAC
TTCGACGCTG CGGTCAACGC TGTCGTCAAT TCCAAGCCCG AAGCGGTCTT CCTCGCCTCC
TTCGAGGAAG GCGTCCAGGC CATCTCCGGC CTGCTGGAAG CCGGTCTCAA GGCCGACCAG
ATGTACAGCG CCGACGGCAT GAACTCCAGT GACCTCAGCT CGAGAGTCAA CGCGGACGAC
CCCTCGGTGC TCGCCGGGTT CACGGGCACC GCTCCCGGCG TGAACGCTCC CGAGTTCGAG
CAGGCTCTCG CCGAGTTCAA CCCGGACCTG CAGGACTACC AGTTCGCCGC GCAGGTCTAC
GACTGCGCCA TCACCATCGC GCTTGCCGCG GAAGCTGCCG GAAGCACCGA CCCGAAGGAC
TTCGTGTCCG AGATGGTCAA CGTGACCCGC GACGGTGAGA AGTGCACCTC GTTCGTCGAG
TGCCGCGACC TGCTGGCCGA GGGTGCTGAC ATCGACTACG ACGGCATCAG CGGTCCGCTG
GACTTCGACG ACAACGGTAA CGTCACCGCT GCCTCCTTCA TGATCTACGG CTTCAACGAC
AAGGGCGAGT ACGAGATCCT CGACTACGTG GAAAGCGGCG GCAACTAG
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| Protein sequence | MPHTKALGFT AAVAALALGL TACGAGGNDD NGGSGGDGDG LQFGYIFPES GDLAFLGPPQ
ISAAEYAIQE INDAGGVLGT ELPKLIGGDE AGDAAQANET ANRLLDQGVD AILGAAASGM
TKAVIDSITG AEVVQCSGSN TAPDLTDYPD GGYYFRTAPS DLMQGPVLAE TILADGHQSV
AIIYRADDYG EGLANSVSEA LEASGAEVTA KESYDPNATN FDAAVNAVVN SKPEAVFLAS
FEEGVQAISG LLEAGLKADQ MYSADGMNSS DLSSRVNADD PSVLAGFTGT APGVNAPEFE
QALAEFNPDL QDYQFAAQVY DCAITIALAA EAAGSTDPKD FVSEMVNVTR DGEKCTSFVE
CRDLLAEGAD IDYDGISGPL DFDDNGNVTA ASFMIYGFND KGEYEILDYV ESGGN
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