| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1184 |
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| Symbol | |
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| ID | 3580447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1380634 |
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| End bp | 1381515 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637684880 |
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| Product | branched-chain amino acid transport system ATP-binding protein |
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| Protein accession | YP_289245 |
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| Protein GI | 72161588 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00283179 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAGTG ACGTGAACGG AGCCACGGTC GACCGGATGG CCGGAGTGGA CCCGGTACCG
GGGGTTGCCA AACCCGACCC GATCCTCGTC GTCGACGGGG TACGGCGCAG CTTCGGCGGT
CTGACCGCGG TCGACGTGGA GCACCTCGAG GTGCAGCGCG GCACGATCAC GGCGTTGATC
GGCCCCAACG GAGCAGGAAA GTCCACGCTG TTCAACCTCT TGACGGGGTT CGACCGAGTA
GACAGCGGCA CGTGGACGTT CCAAGGCAAG CAGCTCAACG GGCTGGGGGG ACACCGGATC
GCCCGCGAGG GCATGGTCCG CACCTTCCAG TTGACCAAGG CGCTGACCCG GCTGACCGTC
ATGGAGAACA TGCTGCTGGC AGCGCCAGGC CAGACAGGGG AGCGGATCCT CGGCTCCTTC
CTGCGCCCCC AGTGGCGGAA GCAGGAGGAG GCCAACCGGG CCCGGGCCGA GCAGTTGCTG
GAACGGTTCA AACTGCTGGC CAAGAAGGAC GAGATGGCGG GCAGCCTCTC CGGCGGGCAG
CGCAAACTGC TGGAGATGGC TCGCGCGCTC ATGGTGAACC CGACGATGAT CATGCTGGAC
GAGCCCATGG CAGGGGTCAA CCCTGCCCTG GTGCAGTCGC TGCTGGAGCA CATCACCGCC
CTGCGCGACG AGGGCATGAC AGTGCTCTTC GTCGAGCATG ACATGGACGT CATCATGGGG
ATCAGCGACT GGATCGTCGT GCTGTCGGAG GGGAAGGTCA TCGCTGAGGG ACGGCCCTCT
GACATCCGCG CTGACCAGCG AGTGATCGAC GCCTACCTGG GTTCTGGGTA CGAGGAATCC
GGTCGCGAGC CGCAGACCGA CACCGGAGAA AGCCATGAGT GA
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| Protein sequence | MSSDVNGATV DRMAGVDPVP GVAKPDPILV VDGVRRSFGG LTAVDVEHLE VQRGTITALI
GPNGAGKSTL FNLLTGFDRV DSGTWTFQGK QLNGLGGHRI AREGMVRTFQ LTKALTRLTV
MENMLLAAPG QTGERILGSF LRPQWRKQEE ANRARAEQLL ERFKLLAKKD EMAGSLSGGQ
RKLLEMARAL MVNPTMIMLD EPMAGVNPAL VQSLLEHITA LRDEGMTVLF VEHDMDVIMG
ISDWIVVLSE GKVIAEGRPS DIRADQRVID AYLGSGYEES GREPQTDTGE SHE
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