Gene Tfu_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1179 
Symbol 
ID3580441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1374085 
End bp1375515 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content65% 
IMG OID637684874 
Productpyruvate kinase 
Protein accessionYP_289240 
Protein GI72161583 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0469] Pyruvate kinase 
TIGRFAM ID[TIGR01064] pyruvate kinase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTACACG TGACACGTCG AGCAAAGATT GTCGCGACCC TTGGACCGGC TACCTCGAGC 
CCTGAAGTCC TCCGCAAGCT CGTCGACGCC GGCCTGGACG TAGCGCGACT CAACCTCAGC
CACGGTACCC ACGACGACCA CCAAACCATG TATCGCAACG TCCGCGCCGC AGCGGAGGCC
AGCGGACGTA ATGTCGGTAT TCTCGCCGAC CTGCAAGGGC CGAAGATCCG TCTCGGGACG
TTCGTCGACG GATCCGTGAC CCTCAGCCCC GGTGACGAGT TCACCATCAC CATCGACGAT
GTACCCGGGG ACCGCCACCG GGTCTCCACC ACATATAAAG GACTCCCTGG TGATGTCCGT
CCTGGCGACC GCGTCCTCAT CGACGACGGT CGCGTTGTTT TGGAATGCGT CAAAAGCACC
AGCACGGATG TCCACACCCG CGTCATCGTC GGCGGCCCGG TATCCAACCA CAAAGGGCTC
AACCTGCCCG GGGTGTCGGT TGCGGTCCCC GCGCTGACCG AAAAAGACGA ACGGGACCTG
CGCTGGGCCC TGGAGCAGGG CGTCGACATG GTGGCGCTCT CTTTTGTGCG CAGCCCCGCC
GACGCGGAAG ACGTCCACCG GGTCATGGAC GAGATGGGCG TGCACGTCCC CCTCATCGCC
AAGATCGAAA AACCTCAGGC GGTGGAGCGG CTTCAGGACA TCATCGAGGC TTTCGACGGC
GTCATGGTCG CCCGCGGCGA CCTCGGTGTC GAACTCCCCC TCGAAAATGT GCCCATGGTG
CAGAAACGCG CCATTGAACG GTGCCGGGAC AAAGCCAAAC CGGTCATCGT CGCCACGCAG
ATGCTCGAAT CCATGATCCA CAACCCGCGC CCCACGCGGG CTGAGGCTTC TGACGTGGCT
AACGCCGTCC TCGACGGCGC GGACGCAGTC ATGCTCTCCG GCGAGACCAG CGTCGGAAAG
TACCCCGTGG AGACCGTGCA GACCATGGCG CGGATCATCG CCGCCGCCGA ACAGGAGTCC
CTGCGCGCCT CCCACATCCT CCACCGGGTC CCGGAGACCG TGGGCGGGTC GATCGCCCGA
GCCGCTGCCG AAGTCGGAGC CACCGTGGGC GCCAAGGCCC TTGTCGCCTT CACCAGCAGC
GGGGAGACTG CACGCCGGCT CGCCCGCTAC CGTTCCCCCA TTCCGCTGCT GGCGTTCACC
ACCGAGCCTG CCACCCGCGC CCAGCTCTCC CTCACCTGGG GTGTGGAAAC CCACCTCGTG
CCGTGGGTGG ACAACACCGA CGACATGGTC CGCCAGGTCG AGAACGAACT CCTGGACATG
GACTACCAGA AGGGCGACAA AGTCGTCATC GTCGCGGGAA GCCCGCCTGG CACCCGAGGG
TCGACCAACA TGTTGCGCGT GCACCGTATG GGTGACGCCA TCTCAAACTG A
 
Protein sequence
MLHVTRRAKI VATLGPATSS PEVLRKLVDA GLDVARLNLS HGTHDDHQTM YRNVRAAAEA 
SGRNVGILAD LQGPKIRLGT FVDGSVTLSP GDEFTITIDD VPGDRHRVST TYKGLPGDVR
PGDRVLIDDG RVVLECVKST STDVHTRVIV GGPVSNHKGL NLPGVSVAVP ALTEKDERDL
RWALEQGVDM VALSFVRSPA DAEDVHRVMD EMGVHVPLIA KIEKPQAVER LQDIIEAFDG
VMVARGDLGV ELPLENVPMV QKRAIERCRD KAKPVIVATQ MLESMIHNPR PTRAEASDVA
NAVLDGADAV MLSGETSVGK YPVETVQTMA RIIAAAEQES LRASHILHRV PETVGGSIAR
AAAEVGATVG AKALVAFTSS GETARRLARY RSPIPLLAFT TEPATRAQLS LTWGVETHLV
PWVDNTDDMV RQVENELLDM DYQKGDKVVI VAGSPPGTRG STNMLRVHRM GDAISN