| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1178 |
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| Symbol | |
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| ID | 3580440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1373465 |
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| End bp | 1374034 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637684873 |
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| Product | peptidase C56, PfpI |
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| Protein accession | YP_289239 |
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| Protein GI | 72161582 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.285648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCCGCA CCGCACTCGA CGGAGTCGAC GTCGCTGTCC TCATTGCTCC GGAAGGCGCC
GAACAGGTGG AGCTCACCGT CCCCTGGGAC GCGATCCGTG ACGCTGGGGG CCGCCCCCGA
CTGATCTCCA CCACCGGCGG CCGTGTCCAA GCCTTCGACC ACCTCGACCG GGCCGACACG
TTTACCGTGG ACACCACCGT CCACCAGGTC ACTGCCCACG ACTTCGACGC GCTCCTGCTC
CCCGGAGGAG TAGCCAACCC CGACTACCTG CGCACCCATG AGCGCGCGGT CGCGTTCGTC
CGTGAGTTTT TCGACACAGG GCGGCCGGTC GCCGCGATCT GCCACGCCCT GTGGATCCTC
ATCGAAGCCG GAGTGGTCCG CGGCCGCACT CTCACGTCGT ATCCCAGCCT GCGCACGGAT
CTCGTCAACG CCGGGGCCAC GTGGGTGGAT CGAGAGGTCG TCGTCTCCAC TGAAGGCCCC
AGTACGCTCA TCACCAGCCG CAACCCCAAA GACCTTCCGG CGTTCACCAA AGCCATCGTC
GAGGAGTTCG CGGTGAAGAC AACAGCGTGA
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| Protein sequence | MARTALDGVD VAVLIAPEGA EQVELTVPWD AIRDAGGRPR LISTTGGRVQ AFDHLDRADT
FTVDTTVHQV TAHDFDALLL PGGVANPDYL RTHERAVAFV REFFDTGRPV AAICHALWIL
IEAGVVRGRT LTSYPSLRTD LVNAGATWVD REVVVSTEGP STLITSRNPK DLPAFTKAIV
EEFAVKTTA
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