| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1173 |
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| Symbol | |
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| ID | 3580857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1365439 |
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| End bp | 1370001 |
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| Gene Length | 4563 bp |
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| Protein Length | 1520 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637684868 |
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| Product | glutamate synthase (NADH) large subunit |
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| Protein accession | YP_289234 |
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| Protein GI | 72161577 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCAG GCCACAACAG GCGTCCCACC GGTCAATCCC GCCCCCGCGC CACAGCTGAA
GGGCTCTACG ACAGCTCCTA CGAACACGAC TCCTGCGGTG TGGGTTTCGT CGCCGACCTG
ACGGGACGCC GCAGCCACGC CATTGTTGAC CAGGCACTCA CCGTCCTCCG TAACCTCGAC
CACCGCGGCG CTTCAGGAGC CGACCCCGAC GACGGCGACG GGGTGGGCAT CCTCACCCAC
ATCCCCCACG AGCTCTACCG CGACGTCTGC GGTTTCCCGC TCCCCGACGC TGGGGCCTAC
GCCGCAGGAA TCGCGTTCCT CCCCACCGAC GAAGCCGCCC GCGCCGCCGC GGTCGCCACC
ATCAACCGCA TCGCCGCAGA AGAACACCTC ACCGTGCTCG GCTGGCGCGA CCTGCCCGTC
GACCCGCGGC ACTGCGGACC GGTGGCCCGC GAAACCATGC CGTTCTTCGC GCAAGTGTTC
CTCGCCGGCC GTCCCGGGAC CCCCACCGAA GGGCTCACCG GGATCGACCT GGAACGCTAC
GCCTACTGCG TGCGCAAGCG CGCCGAACAC GAAGCCGGCG TCTACTTCGC CAGCCTTTCG
CCGCGCACCA TCACCTACAA GGGCATGCTG ACCACACCCC AGCTCAAGCC CTTCTTCCCT
GACCTCGCCG ACCCGCGGTA CACGTCGGGG CTGGCGCTGG TGCACTCGCG GTTCTCCACC
AACACCTTCC CGTCGTGGCC CTTGGCGCAC CCTTTCCGCT ACATCGCCCA CAACGGGGAG
ATCAACACGG TCAAAGGCAA CCGCAACTGG ATGCGGGCCC GCGAAGCAAC CCTCGCCAGC
GACCTCATCC CCGGCGACCT CTCCCGGCTC TTCCCCATCG TCGACCCCGA CGAGTCCGAC
ACCGCGTCCT TCGACGCCGC TCTTGAACTG CTGCACTTGG GCGGACGGTC CCTGCCGCAC
GCGGTGCTCA TGATGATCCC CGAGCCGTGG GAAAACCACA CCGAAATGGA CCCGGCGGTG
CGGGCCTTCT ACGAGTTCCA CGCCATGCTC ATGGAGCCGT GGGACGGACC GGCCTCGGTC
ACCTTCACGG ACGGCACGGT CATCGGCGCG GTCCTGGACC GCAACGGCTT GCGCCCCGGC
CGCTACTGGG TCACCGACGA CGGGCTTGTC GTCATGGCCA GCGAAGTCGG AGTCCTCGAC
ATCGACCCGG CGCGCATCGT CCGCAAAGGC CGGCTGCAGC CCGGGCGGAT CTTCGTCGTC
GACACCGCGC GCGGCCGCAT CCTCGACGAC GCGGAAGTCA AAGCGGAACT CGCCGCCGAA
CACCCCTACG CCGAGTGGCT CGCCGACAAC GTGGTGCGCC TCGCCGACCT GCCCGCAGTC
CCAGCGGAGC CCGTCGACGA CCTCGTCCAC CACCAGCGGG TCTTCGGCTA CACCGAAGAA
GAGCTGCGCC TGCTGCTCAC GCCCATGGCC CGCACCGGCG CCGAAGCCGT CGGCTCCATG
GGCACCGACA CCCCGGTGGC GGTACTGTCC CACCGGCCCC GCCAGCTCTT CGACTACTTC
ACCCAGAACT TCGCCCAGGT CACGAACCCG CCGCTGGACG CGATCCGCGA AGAACTGGTC
ACCAGCCTCC GCACGGTGCT GGGCTCAGAG GAGAACGTGC TCTCCCCGGA CCCCGAAGAC
TGCCGCCGGA TCGTGCTGGA CACCCCCGTC CTCCAGGAAG CCGAGCTCGC CGCCCTCCTG
CGCGCCGGCA GCGTGGACGG CGACCCTGCT TTCCGCGCCC ACATCGTCCG CGGCGTCTAC
CCCGCCTCCG GCGGTGGTAA AGCCCTGACC GCGCGCCTCG ACGAGATCTG CGCGGAAGTG
TCCCAGGCCA TCGCGGACGG TGCGCACCTC ATCGTGCTCA GCGACCGCGG CGCCGACGCC
GACCACGCGC CTATCCCGTC ACTGCTGCTC ACCGGCACCG TCCACCACCA TCTCGTGCGG
GAGAAGACCC GCACCGAGGT CGGCCTCATC GTGGAATCCG GCGACGCCCG CGAATGCCAC
CACATCGCCC TGCTGCTGGG CTACGGCGCC TCCGCTGTCG TCCCCTACCT GGCTCTGGCC
ACGGTCCGCG ACCTTGCCCG CAGCGGCGTC ATCCCCGGCA TCGACCCGGA CACGGCCGCC
CGCAACACGG TCAAAGCCTT CGGCAAAGGC CTGCTGAAGA TCATGTCCAA GATGGGCGTG
TCCACGGTCA GCTCCTACAC GGGCGCGCAG ATCTTCGAAG CCCTCGGCCT CGGCCAAGAG
GTCATCGACC GGGCGTTCGC CGGCACGACG TCGCGGCTCG GCGGCATCGG CTTCGACGTG
CTCGCGGAAG AAGTGCGCCG CCGCCACGCC GCCGCCTACG CGCCCAACCC TGCCGCGCAC
CGCCGGCTCC CAGTCGGCGG CGAATACCAG TGGCGCCGGG AAGGCGAACC GCACCTGTTC
AACCCGGAGA CCGTCGCGAA ACTCCAGCAC GCCACCCGGA CCGGGAGCTA CGACCTGTTC
AAGGAGTACA CCGCCAAAGT CGACCAGCAG GCCGAAACGC TCATGACCCT GCGCGGCCTG
TTCACCCTCC GCGAAGGCGT GCGCTCGCCC GTGCCGCTCG ACGAAGTCGA ACCGGTCGAG
TCGATCGTCG CACGCTTCTC CACCGGGGCC ATGTCCTACG GCTCCATCTC CGCGGAAGCC
CACGAAACCC TCGCCATCGC CATGAACCGG CTCGGCGGCA AATCCAACAC CGGGGAAGGC
GGCGAAGACC CGCGCCGCTT CACCCCGGAC CCCAACGGGG ACCTGCGGCG CAGCGCCATC
AAACAGGTGG CGTCCGGCCG TTTCGGCGTC ACCGCGCTCT ACCTGACCAA CGCCGACGAC
ATCCAGATCA AGATGGCGCA GGGCGCTAAG CCGGGGGAGG GCGGCCAGCT GCCCGGCCAC
AAGGTCTACC CGTGGGTGGC GGAAACCCGG CACTCCACCC CCGGTGTCGG CCTGATCTCC
CCGCCGCCGC ACCACGACAT CTACTCGATT GAGGACCTAG CCCAGCTCAT TCACGACTTG
AAGAACGCCA ACCCGGCGGC GCGCATCCAC GTCAAACTGG TCTCCGAAGC CGGGGTGGGC
ACGATCGCCG CGGGAGTGGC CAAAGCCCAC GCGGACGTGG TCCTCATCTC CGGGCACGAC
GGCGGCACCG GGGCGTCCCC GCTCACCTCC ATCAAGCACG CGGGCACCCC TTGGGAGCTC
GGCCTCGCCG AAACCCAGCA GACCCTGCTG CGCAACGGGC TGCGCGACCG CATCGTCGTG
CAGGTCGACG GCCAGCTCAA AACCGGTCGG GACGTGATCA TCGCCGCCCT GCTGGGCGCG
GAAGAGTTCG GGTTCGCCAC CGCGCCGCTC GTCGTCTCCG GGTGCGTCAT GATGCGGGTC
TGCCACCTGG ACACCTGCCC GGTAGGGGTG GCCACCCAAA ACCCTGAACT GCGTAAACGC
TTCAGCGGCA AGCCCGAGTA TCTGGTGAAC TTCTTCACGT TCATCGCCCA AGAGGTGCGC
GAATACCTGG CCGCGCTCGG CTTCCGCAGC CTGGACGAGG CCATCGGGGC CGTGGAGCTC
CTCGACGTGC GCGACGCTGT CGACCACTGG AAAGCGTCCG GGCTCGACCT GTCCCCGATC
CTGCACCGGG TGGAGCCGCA GCCGCACGAC CACCGCCGCC AGGTCCGCGC GCAAGACCAC
GGCCTGGACC GGGCCCTGGA CCGCACCCTC ATCCAACTGT CGGCGGGCGC ACTGGAATAC
GGCGCCCCGC TCACCCTCGA CCTGCCGATC CGCAACGTCA ACCGGACTGT CGGCACCATG
CTCGGCCACG AGGTCACCAA ACGCTACGGC GCCAAAGGTC TGCCCGACAA CACCATCGAC
ATCACCTTCA CCGGCTCCGC CGGCCAGTCG TTCGGCGCGT TCCTCCCCCG TGGGATCACG
CTGCGCCTTG TCGGCGACGC CAACGACTAC GTCGGCAAAG GCCTGTCCGG GGGACGGATC
ATCGTCCGCC CCGCGGACAC CGCCCCGTTC GCCGCTGAAG AGAACATCAT CGCCGGCAAC
GTCATCGCCT ACGGCGCCAC CTCCGGGGAA CTGTTCCTCC GCGGCATCGT CGGAGAACGG
TTCTGCGTCC GCAACTCGGG GGCGCTCGCC GTGGTCGAAG GGGTCGGCGA CCACGGATGC
GAGTACATGA CCGGGGGCCG CGCCGTCATC CTCGGACCTA CCGGACGCAA CTTCGCGGCC
GGCATGTCCG GCGGCATCGC CTACGTCCTC GACCTGGACG AGCGGCGTGT CAACACCGAG
ATGGTGGACA TCGACCCGCT CGACGACGCC GACCGCGCCT TCCTGAAAGA GGTGCTCACC
CGCCACCACG CCGAGACCGG CTCCCCGGTG GCGCAGCGCC TGCTTGCCGA CTTCGCCACC
GCGGTCACCC GCTTCGCCAA GATCATGCCG CGCGACTACA AGCGCGTCCT GGCTGCCGTA
GCCGAAGCCG AACGTGACGG ACGTGACGCG GCCGAAGCCA TCATGGCCGC CGCCCAGTCC
TGA
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| Protein sequence | MAAGHNRRPT GQSRPRATAE GLYDSSYEHD SCGVGFVADL TGRRSHAIVD QALTVLRNLD
HRGASGADPD DGDGVGILTH IPHELYRDVC GFPLPDAGAY AAGIAFLPTD EAARAAAVAT
INRIAAEEHL TVLGWRDLPV DPRHCGPVAR ETMPFFAQVF LAGRPGTPTE GLTGIDLERY
AYCVRKRAEH EAGVYFASLS PRTITYKGML TTPQLKPFFP DLADPRYTSG LALVHSRFST
NTFPSWPLAH PFRYIAHNGE INTVKGNRNW MRAREATLAS DLIPGDLSRL FPIVDPDESD
TASFDAALEL LHLGGRSLPH AVLMMIPEPW ENHTEMDPAV RAFYEFHAML MEPWDGPASV
TFTDGTVIGA VLDRNGLRPG RYWVTDDGLV VMASEVGVLD IDPARIVRKG RLQPGRIFVV
DTARGRILDD AEVKAELAAE HPYAEWLADN VVRLADLPAV PAEPVDDLVH HQRVFGYTEE
ELRLLLTPMA RTGAEAVGSM GTDTPVAVLS HRPRQLFDYF TQNFAQVTNP PLDAIREELV
TSLRTVLGSE ENVLSPDPED CRRIVLDTPV LQEAELAALL RAGSVDGDPA FRAHIVRGVY
PASGGGKALT ARLDEICAEV SQAIADGAHL IVLSDRGADA DHAPIPSLLL TGTVHHHLVR
EKTRTEVGLI VESGDARECH HIALLLGYGA SAVVPYLALA TVRDLARSGV IPGIDPDTAA
RNTVKAFGKG LLKIMSKMGV STVSSYTGAQ IFEALGLGQE VIDRAFAGTT SRLGGIGFDV
LAEEVRRRHA AAYAPNPAAH RRLPVGGEYQ WRREGEPHLF NPETVAKLQH ATRTGSYDLF
KEYTAKVDQQ AETLMTLRGL FTLREGVRSP VPLDEVEPVE SIVARFSTGA MSYGSISAEA
HETLAIAMNR LGGKSNTGEG GEDPRRFTPD PNGDLRRSAI KQVASGRFGV TALYLTNADD
IQIKMAQGAK PGEGGQLPGH KVYPWVAETR HSTPGVGLIS PPPHHDIYSI EDLAQLIHDL
KNANPAARIH VKLVSEAGVG TIAAGVAKAH ADVVLISGHD GGTGASPLTS IKHAGTPWEL
GLAETQQTLL RNGLRDRIVV QVDGQLKTGR DVIIAALLGA EEFGFATAPL VVSGCVMMRV
CHLDTCPVGV ATQNPELRKR FSGKPEYLVN FFTFIAQEVR EYLAALGFRS LDEAIGAVEL
LDVRDAVDHW KASGLDLSPI LHRVEPQPHD HRRQVRAQDH GLDRALDRTL IQLSAGALEY
GAPLTLDLPI RNVNRTVGTM LGHEVTKRYG AKGLPDNTID ITFTGSAGQS FGAFLPRGIT
LRLVGDANDY VGKGLSGGRI IVRPADTAPF AAEENIIAGN VIAYGATSGE LFLRGIVGER
FCVRNSGALA VVEGVGDHGC EYMTGGRAVI LGPTGRNFAA GMSGGIAYVL DLDERRVNTE
MVDIDPLDDA DRAFLKEVLT RHHAETGSPV AQRLLADFAT AVTRFAKIMP RDYKRVLAAV
AEAERDGRDA AEAIMAAAQS
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