| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1166 |
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| Symbol | trpA |
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| ID | 3580850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1357309 |
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| End bp | 1358121 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637684861 |
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| Product | tryptophan synthase, alpha chain |
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| Protein accession | YP_289227 |
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| Protein GI | 72161570 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTGT TGCGCCGCAA ACTCGCCGAA GCCAAAGCAG AAGGGCGAGC CGCACTGGTC
GGCTACTACC CGGCCGGTTT CCCCGACGTC GCGTCCTCCA TCCGGGTCGT CCAAGCCATG
GTGGCGGGCG GCTGCGACGT GATCGAAGTA GGGTTCCCCT ACTCCGACCC CACCATGGAC
GGCCCCGTGA TCCAGCAGGC CGCTGACCGG GCGCTCGCCG CGGGCACCAC CCCTAAGGAC
GTGCTCGCCG TGGTGCGCGC CGTCGCCGAC GCCGGGGCCG CGGCCCTCGT CATGTCCTAC
TGGAACCCCA TCGAAAAGTA CGGGGTGGAC GCGTTCGCCG CCGACCTGGC CGCCGCCGGA
GGGTCGGGAC TCATCACCCC GGACCTGATC CCCGAAGAAG CCGAGCCGTG GATCAAGGCC
AGCGACGCCG CGGGGATCGA CCGGATCTTC CTGGTCGCCC CGTCCTCCAC CGACGAGCGG
CTCGCCAAGA CCTGCGCGGC GTCCCGCGGA TTCGTCTACG CCGCCTCGCT GATGGGGGTG
ACGGGGACCC GCGACAAGGT GGCCGCGACC GCGCGGAGGC TCGTGGAACG CACCCGCGCC
GTCACCCGAG ACAGCGGACT GCCTATCTGC GTCGGACTCG GGATTTCCAA CGGTGCCCAA
GCCGCCGAAG TCGCTTCCTA CGCCGACGGG GTCATTGTCG GCACCGGCTT CTGCCAGCGG
GTTCTGGACG CGCCCGACGT GGACACCGCA TGCCAGCAGG TCCGCGACTT CGCCGCGGAA
CTCGCGGCGG GGGTGCGTGC GGCCGCTCGG TGA
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| Protein sequence | MTVLRRKLAE AKAEGRAALV GYYPAGFPDV ASSIRVVQAM VAGGCDVIEV GFPYSDPTMD
GPVIQQAADR ALAAGTTPKD VLAVVRAVAD AGAAALVMSY WNPIEKYGVD AFAADLAAAG
GSGLITPDLI PEEAEPWIKA SDAAGIDRIF LVAPSSTDER LAKTCAASRG FVYAASLMGV
TGTRDKVAAT ARRLVERTRA VTRDSGLPIC VGLGISNGAQ AAEVASYADG VIVGTGFCQR
VLDAPDVDTA CQQVRDFAAE LAAGVRAAAR
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