Gene Tfu_1157 details

Gene Information

• Locus tag: Tfu_1157
• ID: 3580841
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 1347519
• End bp: 1349435
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637684852
• Product: ABC-type multidrug transport system ATPase and permease components
• Protein accession: YP_289218
• Protein GI: 72161561
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0429798
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCAGG GGCCAGCCGC AGCGAAGCCC GACGTCAGCT CTCGAGTCTT CACCGAGGGG 
ATGCGCATCC TGTGGATCGC CATCCGCACG GAACCGTGGG TCTTCAGTGC CGCCGTGGCC 
GGTGCAGTCC TCTACGCGGT CGCCGCTGTC GCCTCAGCCT CCGTCCTCGG CGCCGTCGCC 
GAACAGGTCA TCCTGCCCGC CATCATGGAG CAGCGCACCA CCGTGGCCGC GGTCGCCACC 
GCGTCCGCGG TCGTGTTCGC GGTCGGCTTC CTCAAAGCCC TCGGACTGGG GGCGCGCCGC 
TTCTACGCCG GGCTCATGCA GTACCGCATG CAGGCGCGCT ACCGGCGCGC GGTCGCCCGC 
CGGTACCTGG AACTCCCGCT GGCCTGGCAC CAGCGGCACC CCGCAGGGCA GCTCCTGTCC 
AACGCCAACG CCGACGTTGA AGCGACCTGG CAGCCGCTTG CCCCGCTCCC CATGGCCGTG 
GGCAGCACCG CCATGCTGGT GATCGCCGCG GGGGCGATGC TCGCCACCGA CCTCGTGCTC 
GCCCTGGTGG GCTTCGTCGT CTTCCCGCTC CTCGCCATCG CCAACCTCGT CTTCCAGCGC 
CGCGTGTCCC CCGCAGCCAC CCACGCGCAA GCCCTGCGCT CCCAGGTGAG CGAGGTCGCC 
CACGAGTCCT TCGACGGCGC ACTCGTCGTC AAGACCCTGG GACGCGAAGA CATGGAGACG 
GAACGGTTCA CCCGGGCCGC GGAACGCCTC CGCGACGCCC AGATCCGCGT GGGCCGGATG 
CGGGCCGCAT TCGACCCGCT GCTGGAGGCA CTGCCCAACC TGGGCGTGCT CGTGGTGCTG 
CTCATCGGGT TGATCCGCTT GCAGCGGGGC GACGTCACCG CAGGCGACAT CGTCCAGATC 
GCCTACCTGT TCACCCTGCT GTCGCTCCCG ATCCGCTCCC TGGGCTGGCT GCTCGGGGAC 
CTGCCCCGCA GCGTGGTGGG CTGGCGGCGG GTCAGCGCAG TGCTCAACGC GCAAGGAGGC 
ACCGACTACG GCAAGGAACG GCTGCACGGC GAGGGCGGCC TGGCGGTAAG CGTCCGCAAC 
CTCAGCTTCT CCTACGCCGA CACCTCCCCC GCCGACCTCG GCCGGGACAC CCTGGAAGGC 
GGACGCGGCC TGGACGCGAC CGGAAACGAA GAAACACCAC GCATCACCGT GCTGCGCGAC 
GTCACCCTGG ACCTGGCGCC GGGGAAGGTG ACCGCCCTGG TCGGCCCCAC CGGGTCCGGG 
AAGTCCACCC TCACCATGTT GCTGGCCCGC CTCGTCGACC CCGACCACGG CGACGTCCTG 
GTGAACGGGG TGGACGCCCG CCGCTACGCC CCCGGGGAAC TCGCCTGCGC TATCGCGCTC 
GTGCCGCAGA CGACGTTCAT CTTCGACGAC ACTGTCCGCG ACAACATCAC CCTGGGCTTG 
GACGTCGACG ACACCGAAGT CTGGCAGGCC CTGCGCCTCG CCCACGCCGA CTCTTTCGTG 
GCGGCCCTGC CCCGAGGGCT CGACACGCGG CTGGGGGAGC GCGGCACCAG CCTGTCCGGC 
GGGCAGCGGC AGCGCCTCGC CCTGGCCCGC TCCCTGGTGC GCCGACCCCG ACTGCTCATC 
CTGGACGACG CGACCTCCGC GGTCGACCCC CAGGTCGAAG CCCGGATTCT CGGCGGGCTA 
CGGGAAGCCG ACCTGGCGGG AGCCACCGTC GTGGTCGTGG CCTACCGCCG GGCCACTATC 
GAACTCGCCG ACGAAGTCGT CTACCTCGAA CAAGGCACAG TCCGCGACCG GGGCACCCAC 
GAAGAGCTGC TGGCCCGCTC CCCCGGATAC CGCCGTCTCG TCACCGCCTA CGAGCAGGCT 
GCCCAACGGC GCGCTGCCGC CGCGTCCCGA TCCGCCGACC AGGAGGCTGT CCGATGA 

 

Protein sequence

MAQGPAAAKP DVSSRVFTEG MRILWIAIRT EPWVFSAAVA GAVLYAVAAV ASASVLGAVA 
EQVILPAIME QRTTVAAVAT ASAVVFAVGF LKALGLGARR FYAGLMQYRM QARYRRAVAR 
RYLELPLAWH QRHPAGQLLS NANADVEATW QPLAPLPMAV GSTAMLVIAA GAMLATDLVL 
ALVGFVVFPL LAIANLVFQR RVSPAATHAQ ALRSQVSEVA HESFDGALVV KTLGREDMET 
ERFTRAAERL RDAQIRVGRM RAAFDPLLEA LPNLGVLVVL LIGLIRLQRG DVTAGDIVQI 
AYLFTLLSLP IRSLGWLLGD LPRSVVGWRR VSAVLNAQGG TDYGKERLHG EGGLAVSVRN 
LSFSYADTSP ADLGRDTLEG GRGLDATGNE ETPRITVLRD VTLDLAPGKV TALVGPTGSG 
KSTLTMLLAR LVDPDHGDVL VNGVDARRYA PGELACAIAL VPQTTFIFDD TVRDNITLGL 
DVDDTEVWQA LRLAHADSFV AALPRGLDTR LGERGTSLSG GQRQRLALAR SLVRRPRLLI 
LDDATSAVDP QVEARILGGL READLAGATV VVVAYRRATI ELADEVVYLE QGTVRDRGTH 
EELLARSPGY RRLVTAYEQA AQRRAAAASR SADQEAVR