| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1108 |
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| Symbol | murD |
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| ID | 3579290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1292046 |
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| End bp | 1293443 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637684803 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_289169 |
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| Protein GI | 72161512 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCTGA GGGGACGCCG GGTCTGCGTC ACAGGACTGG GGGTCTCCGG ACCCCCTGTC
GCCCGAGCAC TGCTGAAACA CGGGGCGCAC GTCACCGTCG TGGAAGGCCG CGACGACGAC
GTGAACCGGG AACGCGCCCG CACCCTGCGA GAACTCGGCG CCACCGTGGA ACTCGGTGAG
CCCACCACAC TCCCCGCGGG AACCGACCTC GTCGTCACCT CACCCGGCTG GCGGCCCGAC
GCGCCCGTCC TGGTCGCGGC GGCCGACGCC GGGGTCGAGG TGATCGGCGA CGTCGAACTG
GCCTGGCGGC TCCGCCCCGC CGGCCAGGTC TGGCTGGCCG TCACCGGCAC CAACGGCAAG
ACCACCACGG TGCGCATGCT CGAAGCGATG CTGCGGGCCG ACGGGCGGCG CGCCCTCGCC
GTCGGCAACG TGGGCACCCC CGTCATCGAC GCGGCGCTCG CCGACGGCCC CGACCGCTGG
GACATCCTCG CCGTGGAACT CTCCAGCTTC CAACTCCACT GGTCCGCCAC CGTGCAGCCG
CACGCGGCCG CGATCATCAA CCTCGCCCCC GACCACTTGG ACTGGCACGG AGGCATGGAA
CCCTACGCGG CCGCCAAGGC CAAGGTCTAC GGCGCCGGCA CCATCCGCAT CGTCAACGCC
GCCGACCCTG CGCTGCGCGA GCTCGCCGAA ACCCACGGCG ACCCCGCTGC ACCGCTCGTC
GGATTCAGCC TGGACGTGCC GCGCGCCGGA GAACTCGGAC TCGTCGAGGA CCTGCTCGTC
GACCGCGCTT TCGTCGCCAA CCCGCGCACC GAGGCCACCG AACTCGCCAC CCTGGCCGAC
GTCACCCCCC GCGCACCGCA CAACGTGGCG AACGCGCTGG CCGCCGCCGC ACTCGCCCGG
TCGATCGGCG TCGCCCCGGA GGCGGTGCGC ACCGGACTGC GGAACTTCCA GCCCGAACCG
CACCGCATCG CCCACGTGGC CACCATCGAC GGGGTCGACT ACGTCGACGA CTCCAAAGCG
ACGAACGCGC ACGCCGCCGC CGCTTCGCTG GCCGCCTACC CCTCGGTGGT GTGGATCGCC
GGCGGCCTCC TCAAAGGCGC CGACGTCACC GGCCTGGTGC GGCAGGCCGC GAGCCGGCTG
CGCGGCGTCG TCCTGCTCGG CGCCGACCGG CACCAGTTGC GGGAAGCGCT CGACACGCAC
GCCCCCCACG TGCCTGTCGT GGACGTGGCC CGCACCGACG AAGGCGCCAT GGCTGAAGTG
GTGGCCGCCG CGGCCCGGCT CGCCCAGAAA GGCGACACCG TGCTCCTCGC CCCCGCAGCA
GCCTCCATGG ACATGTTCAC CAACTACATC GAACGGGGTG AAGCGTTCGC CCGAGAAGTC
CGTGCACTCG CCGGCTGA
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| Protein sequence | MELRGRRVCV TGLGVSGPPV ARALLKHGAH VTVVEGRDDD VNRERARTLR ELGATVELGE
PTTLPAGTDL VVTSPGWRPD APVLVAAADA GVEVIGDVEL AWRLRPAGQV WLAVTGTNGK
TTTVRMLEAM LRADGRRALA VGNVGTPVID AALADGPDRW DILAVELSSF QLHWSATVQP
HAAAIINLAP DHLDWHGGME PYAAAKAKVY GAGTIRIVNA ADPALRELAE THGDPAAPLV
GFSLDVPRAG ELGLVEDLLV DRAFVANPRT EATELATLAD VTPRAPHNVA NALAAAALAR
SIGVAPEAVR TGLRNFQPEP HRIAHVATID GVDYVDDSKA TNAHAAAASL AAYPSVVWIA
GGLLKGADVT GLVRQAASRL RGVVLLGADR HQLREALDTH APHVPVVDVA RTDEGAMAEV
VAAAARLAQK GDTVLLAPAA ASMDMFTNYI ERGEAFAREV RALAG
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