| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1105 |
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| Symbol | murE |
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| ID | 3579287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1287604 |
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| End bp | 1289208 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637684800 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_289166 |
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| Protein GI | 72161509 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.664687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACCCG AACACGTCCA GCCACGTCTG CTCTCCGAAC TCGTCCCACT GCTCGGACCG
GACGCCTTCG TTACTTGTGT CGACCCCGCG GAGCCGCCCC TGGGCACCGC GCCCACCCCT
GCCGCTACTG ACCTCGAACA GGCCAGCAGC GTGGACTCGG TGGTGGTGAC CGGTGTCACC
CACGACTCCC GCGCGGTACG CCCCGGGGAC CTGTACGTGG CCGTCCAAGG GCAGCGTGTC
CACGGCGCTA AATTCGCCGC CCAGGCAGCC CGCGCCGGCG CGGCGGCTGT GCTCACCGAC
CCCGCTGGAT ACGACCGCGC CGCCGCCACC CGGCTGCCCG TCATCACCGT GCCCGACCCC
CGCTCCCGGC TCGGGGACGT GGCCGCCTGG ATCTACGGCC ATCCGGCTCG GGAACTGCTG
CTCATCGGCA CCACCGGAAC CAGCGGCAAG ACCACGGTCA GCTACCTGGT GGAATCCGGG
CTGCGCGAGG CAGGAATGCG CACCGGTCTG GTCGGCACCG TGGAGATCCG GGTCGACGAC
GAGCGCATCG ACTCTTCCCT GACCACCCCG GAGGCCACCG AACTGCACGG CCTGTTCGCC
CTCATGCGGG AGCGCGACGT GGCCGGCGCC GCCATGGAAG TCTCCAGCCA CGCCCTGGCC
CTGGGCCGGG TGGCCGGAGT GCGCTACGAC GTCGCCGTGT TCACCAACCT CTCCCAGGAC
CACTTGGACT TCCACGCCGA CCTGCACGAC TACTTCGAAA CCAAAGCGCG GCTGTTCACT
CCCGAATTCG CCAAAGTCGC CGTGGTCAAC CGGGACGACT CCTTCGGGCG GACCCTCATC
GACCGGATCA CCGAACAGGG CGCGATCCCC GTCACCACGT TCTCCGCCAC CGGCGACACG
GCAGCGGACT GGTATGCCAC CGACGTCGTG CTCGAAGCGG GCGGCAGCCG GTTCCGGGTG
GTCGGCCCCG GAGGCATGGC CATGGACGCT TCCGTGCGGC TGCCGGGCCC GTTCAACGTC
GCCAACGCCA TGGCCGCGAT CGTCGCCCTC ATCGAAGCGG GAGTGCCGCT CCCCACCGCG
GTGGCAGGCG TGGCCGCGGC CCGCGGCGTG CCGGGCCGCA TGGAACGGGT CGACGAAGGA
CAGGACTTCA CCGCCATCGT CGACTATTCG CACAAACCCG GGGCGATTGA GGCGGTTCTC
ACATCGCTGC GCCCCATCAC CGAAGGGCGC CTCACCATCG TCGTGGGCTG CGGCGGCGAC
CGCGACCGGG GGAAACGCCC GCTCATGGGC GAGGCAGCGG CCCGCCTGGC CGACGCGGTC
ATCCTCACCG ACGACAACCC GCGCAGCGAA GACCCGGTCA CCATTATCAC CAGCATGCTT
GAAGGCGTGG CGAAAGTGCC TGTCGCGCAG CGCGCCCGCA TCACCGTGGA ACCGGACCGG
CGGACCGCGA TCGAACTGGC CGTGACCCGT GCCCAGCCCG GAGACGTCGT GGTCGTGGCC
GGCAAAGGGC ACGAACGCGG CCAGCACGTG GGGGACCGCA TCCTCCCCTT CGACGACCGG
GACGTGCTCC GCGAAGCGAT CCGCGCCCGA CTCGACACCG ACTGA
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| Protein sequence | MRPEHVQPRL LSELVPLLGP DAFVTCVDPA EPPLGTAPTP AATDLEQASS VDSVVVTGVT
HDSRAVRPGD LYVAVQGQRV HGAKFAAQAA RAGAAAVLTD PAGYDRAAAT RLPVITVPDP
RSRLGDVAAW IYGHPARELL LIGTTGTSGK TTVSYLVESG LREAGMRTGL VGTVEIRVDD
ERIDSSLTTP EATELHGLFA LMRERDVAGA AMEVSSHALA LGRVAGVRYD VAVFTNLSQD
HLDFHADLHD YFETKARLFT PEFAKVAVVN RDDSFGRTLI DRITEQGAIP VTTFSATGDT
AADWYATDVV LEAGGSRFRV VGPGGMAMDA SVRLPGPFNV ANAMAAIVAL IEAGVPLPTA
VAGVAAARGV PGRMERVDEG QDFTAIVDYS HKPGAIEAVL TSLRPITEGR LTIVVGCGGD
RDRGKRPLMG EAAARLADAV ILTDDNPRSE DPVTIITSML EGVAKVPVAQ RARITVEPDR
RTAIELAVTR AQPGDVVVVA GKGHERGQHV GDRILPFDDR DVLREAIRAR LDTD
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