| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1096 |
|---|
| Symbol | |
|---|
| ID | 3579162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 1276310 |
|---|
| End bp | 1277584 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637684791 |
|---|
| Product | DNA-directed DNA polymerase |
|---|
| Protein accession | YP_289157 |
|---|
| Protein GI | 72161500 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGTC GACAGTTGGA ACGCGGCGAA CCGATGCGCG GGGTCATGAC CGACCGCGGC
ATTGTCCCGT ACGAGGGTCA CCCCGTCAAC GACGCCGACT GCACCATCCT GCACATCGAC
ATGGACGCCT TCTTCGCGAG CGTGGAGGAG CTGCGCCACC CCGACGTCGT CAGGCGTCCC
GTGCTCGTCG GCGGCACCGG GCCGCGCGGG GTCGTCGCCT CCGCCAACTA CCAGGCTCGC
CGCTACGGCA TCCACTCTGC GATGCCGATG TCCCGTGCCC TGCGGCTCTG CCCGCACGCG
GTGGTCTTCC CGCCCGACCA CGAGACGTAC CGGCGCGTCT CCGCCGGCGT GATGGACCTG
CTGCGTTCGA TCACCCCGCA GGTGGAGCAG CTCTCGGTGG ACGAAGCGTT CCTGGACGTG
GCCGGGGCAG ACCGCCGACT CGGCGGCGGA CCGCTCCACA TCGCCCAGCT CATCCGTGCC
CGGATGCGCG CAGAACAAGG GTTGACTTGC TCGGTGGGGA TCGCCGCCAC CAAGTTCGTC
GCCAAGCTCG CCTCCACCCG CTGCAAGCCC GACGGGCTGC TGGTGGTCCC CACCCGGCAC
GTCACCGCGT TCCTGCACCC GCTGCCGGTC GGCGCCCTGT GGGGGGTGGG GGAGCGGACC
GAGCAGGCGC TGCGGCGCAT GGGGCTGCGC ACGGTCGGCG ACGTGGCTCG GACCCCGCCT
GATACGCTCC GCCACGAACT GGGGCAGGCG CTCGGAAACC AGCTCGCGGA ACTCGCGTGG
GGATACGATC CCCGGCCGGT CACCCCGGAG ACCGCGGACA AGAGCGTGAG CACGGAGGAG
ACCTTCCCCA CCGACATCCA CGACCCTGAG CGGATCCGCC GCGAACTGCT GCGCCTGTCC
GAGAAAGTCG CCCGGCGGCT CCGCGCCTCC GGACAGGCGG GACGTACCGT GGGGGTCAAA
CTGCGCCGCG CTGACTTCAG CACAGTTACC CGTTCCCGCA CCCTGCCGGA GCCCACCGAT
GTGGCCCGGC AGATCGCCGC GGTGGCCCGG GAGCTCTATG CTGCCTCCGG ACTGGTGGGC
GCCCCGCTGC GTCTCGTCGG GGTGCGGGTG GAAGGGCTGG TCAGTGCCGA CCGTGTCCAC
CACCAGTTGG CGCTGGATGA GGAAGGCCCG GGGTGGCGCG CCGTGGAGCG GCTGCAAGAC
GAAGTGGTGC GCCGTTTCGG AACCGGTGCC CTCCGACCAG CATCACTGGC ATTATGTGAG
GAAGATGACG TATGA
|
|---|
| Protein sequence | MSRRQLERGE PMRGVMTDRG IVPYEGHPVN DADCTILHID MDAFFASVEE LRHPDVVRRP
VLVGGTGPRG VVASANYQAR RYGIHSAMPM SRALRLCPHA VVFPPDHETY RRVSAGVMDL
LRSITPQVEQ LSVDEAFLDV AGADRRLGGG PLHIAQLIRA RMRAEQGLTC SVGIAATKFV
AKLASTRCKP DGLLVVPTRH VTAFLHPLPV GALWGVGERT EQALRRMGLR TVGDVARTPP
DTLRHELGQA LGNQLAELAW GYDPRPVTPE TADKSVSTEE TFPTDIHDPE RIRRELLRLS
EKVARRLRAS GQAGRTVGVK LRRADFSTVT RSRTLPEPTD VARQIAAVAR ELYAASGLVG
APLRLVGVRV EGLVSADRVH HQLALDEEGP GWRAVERLQD EVVRRFGTGA LRPASLALCE
EDDV
|
|---|
| |