Gene Tfu_1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1087 
Symbol 
ID3579153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand+ 
Start bp1269000 
End bp1269500 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content68% 
IMG OID637684782 
ProductMarR family transcriptional regulator 
Protein accessionYP_289148 
Protein GI72161491 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.502735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAGAG AAGGCGTAAG TACGATGGCC GCCATGGACG CGGTCAACTG GCTCACTGAG 
GAAGAGCAGC GCCTTTGGCG CAGCTTCCTC ACAGTCAACT CCCTGCTCCA GGAGCGGCTC 
GACCGGGACC TGCGGCGCAG GAACGGGCTC ACCCTGGTCG AATACGGCAT CCTGGTCCAC 
CTGTTCGAGG CGGAAGGACG GCGGATGCGC ATGCGCACCC TCGCCGAGAC GGTCCTCGTC 
TCCAAAAGCC GCCTCTCCCA CCAGGTGGCC CGCCTGGAGC GGGACGGATA CGTGCGCCGG 
GAAGACTGCG TGGAGGACCG GCGCGGCTTC TGGGCGGTCC TCACCGACAA AGGCGCTGAA 
GTGCTGCGGG CCGCCGCTCC CGGCCACGTC GCGCAGGTGC GCGAATACCT CTTCGGTCGG 
CTGACCGACG AACAGACCGC TCAACTCCGC GACATCCTGG CGGTCCTCGA ACGCGGACTG 
CGCGACCCCA CCGCGCACTA G
 
Protein sequence
MEREGVSTMA AMDAVNWLTE EEQRLWRSFL TVNSLLQERL DRDLRRRNGL TLVEYGILVH 
LFEAEGRRMR MRTLAETVLV SKSRLSHQVA RLERDGYVRR EDCVEDRRGF WAVLTDKGAE 
VLRAAAPGHV AQVREYLFGR LTDEQTAQLR DILAVLERGL RDPTAH