Gene Tfu_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_1079 
Symbol 
ID3579145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand+ 
Start bp1260910 
End bp1261572 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content70% 
IMG OID637684774 
Productnicotinamide mononucleotide transporter PnuC 
Protein accessionYP_289140 
Protein GI72161483 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3201] Nicotinamide mononucleotide transporter 
TIGRFAM ID[TIGR01528] nicotinamide mononucleotide transporter PnuC 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGCC CCGGCAGCGC ATGGCTGGAG TGGGCCTACG CCGGGTTCAC GCTGTTCGGT 
GAGCATGTCC GCTGGGCCGA CCTGATCGGC AACCTCGCGG CCCTGGCCAC CGTGGCGCTG 
GCGATCCGCC GCACCCTGTG GACCTGGCCC GTCCAGCTCA CCGGCACGTT CCTGCTCTTC 
GTGGTCTCGG TCGACGCCCA CCTGGTCGGC AACGCGCTCA AACAGGTGGT CGTCGCGGGG 
CTCGCCGTCT ACGGGTGGTA CCGCTGGGCG CGCGGAATCC GCGACGAAGG AGACCTCGCG 
GTACGCCCCG CCCACCGGGC AGAACGACTC CGCCTGATCG CCGTCCTGGC CGGAGGAACC 
GCCGCCGTGG GCTGGTTCTT CACCGTCACC GGCTGGTCCT GGGCGCCGTG GCTGGACGCG 
TTCATCTTCG TGGGAAGCGC AGTGGCGATG TACGCCCAAA GCCGCGGGCT CGTCGACTTC 
TGGGTGGTGT GGATCGTCGT GGACATGGTG GGCATCCCCA TCACCGTGCT GTCCGGCCTG 
TGGGTGAGCG GTGTCGTCTA CGGCGTGTTC TTCGTGCTCG CCGTCCTCGG GCTCCGCAAC 
TGGATGCGCC ACTACCGGGC CCGCCGCAAC GCTGAGGCCC CAGCAGTGCA CTCGTTCGCC 
TGA
 
Protein sequence
MSGPGSAWLE WAYAGFTLFG EHVRWADLIG NLAALATVAL AIRRTLWTWP VQLTGTFLLF 
VVSVDAHLVG NALKQVVVAG LAVYGWYRWA RGIRDEGDLA VRPAHRAERL RLIAVLAGGT 
AAVGWFFTVT GWSWAPWLDA FIFVGSAVAM YAQSRGLVDF WVVWIVVDMV GIPITVLSGL 
WVSGVVYGVF FVLAVLGLRN WMRHYRARRN AEAPAVHSFA