| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1076 |
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| Symbol | |
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| ID | 3580068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1257699 |
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| End bp | 1259129 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637684771 |
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| Product | putative RNA-binding Sun protein |
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| Protein accession | YP_289137 |
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| Protein GI | 72161480 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases
[COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0188597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCCAGA GATTCTCATC CCCGTACCGC ACGACCCGGC GCAGCCCTCG CGGTTCCGCG
TCGCGGACCC GCCCCCGGGA CCCGGCCCGC CGCGTCGCCT ACGACGTGCT GTACGCAGTC
CAGACCCGCG ACGCCTACGC CAACCTGCTG CTGCCCGTCC TCCTCCGCGA ACGGGGGATC
ACCGGACGGG ACGCCGGGCT CGCCACCGAG CTGACCTACG GGACTCTGCG CCTCCAAGGC
TCCTACGACG CTGTCCTGGA CGCCTGCGTG GACCGCTCCC TGCGCTCCGT CGACACCGAA
GTCCTCCCCC TGCTGCGCAT GGGCGCCCAC CAACTGCTGT CCATGGACGT CCCCCCGCAC
GCCGCGGTCA GCAGCACCGT CGACCTGGCC CGCCGGATCG TCGGCCACCA CCGCGCCAGA
TTCGTCAACG CGGTCCTGCG CAAAGTCACC GCACGCGACC TCACCGGATG GCTGAGCGTG
CTCGCCCCCG ACCGGAAGAC CGACCCTGTC GGACACCTCG CGATCACCCA CAGCCATCCC
CGCTGGGTGG TCCAGGCGTT CGCGGAAGCG CTCGGCGACG AGACCAGCAG CGGCCTGAAA
GAGACCGAAC GGCTCCTCAC CGCCCACAAC GAGCGGCCCC GCGTCACCCT GCTCGCCAAA
CCCGGGCGCG CCACCGTCAC CGACCTGGTC GACGAAGGCG CTGTCGCCGC CCGCTACTCG
CCGTACGGGG CGGTCCTCCC GGAAGGGGAC CCCGGCATGC TGCGCCTGGT CCGCCAAGGC
CGCGCCGTCG TGCAGGACGA AGCCAGCCAG CTCGTCGCTC TGGCCCTGAG CCGGGTGCCG
GTCTCCGGCC CTGACCAGCA GTGGTTGGAC ATGTGCGCCG GACCGGGCGG AAAAGCCGCC
CTCATGGCCG GACTCGTGGG GGAGCGCGGC GGACGCCTGC TCGCCGCCGA AGTGCAGCCC
GCACGGGCCG GACTGGTCGC CCGCGCCGTC CACCGGTCGC TCGGCAACTC CGCCCGCGTC
ATCGTGGCCG ACTCCACCCA GCCGCCGTGG CGGGACGGCA TTTTCGACCG GGTGCTCGTC
GACGCGCCGT GCACCGGCCT GGGCGCGCTG CGCCGCCGCC CCGAGTCGCG GTGGCGGCGC
ACCCCGGAGA ACCTCGCCGA ACTCGTCCCG CTGCAGCGCG CCCTGCTCAA CCGGGCCCTG
GACGCGGTCC GCCCCGGCGG AGTGGTCGGC TACGTCACCT GCTCACCGCA CCTCGCGGAG
ACCCGCGGCG TCGTTACCGA CGTCCTCGCC GGACGCGACG ACGCGGACCT GCTCAACGCT
GCCCGCCACC TGCCGGAAGT CCCCGACGTC GCCGCCGACC GCTTCGTGCA GTTCTGGCCG
CACCGTCACG GCACCGACGC GATGTTCCTG GCGCTGCTGC GGAAACGCTG A
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| Protein sequence | MTQRFSSPYR TTRRSPRGSA SRTRPRDPAR RVAYDVLYAV QTRDAYANLL LPVLLRERGI
TGRDAGLATE LTYGTLRLQG SYDAVLDACV DRSLRSVDTE VLPLLRMGAH QLLSMDVPPH
AAVSSTVDLA RRIVGHHRAR FVNAVLRKVT ARDLTGWLSV LAPDRKTDPV GHLAITHSHP
RWVVQAFAEA LGDETSSGLK ETERLLTAHN ERPRVTLLAK PGRATVTDLV DEGAVAARYS
PYGAVLPEGD PGMLRLVRQG RAVVQDEASQ LVALALSRVP VSGPDQQWLD MCAGPGGKAA
LMAGLVGERG GRLLAAEVQP ARAGLVARAV HRSLGNSARV IVADSTQPPW RDGIFDRVLV
DAPCTGLGAL RRRPESRWRR TPENLAELVP LQRALLNRAL DAVRPGGVVG YVTCSPHLAE
TRGVVTDVLA GRDDADLLNA ARHLPEVPDV AADRFVQFWP HRHGTDAMFL ALLRKR
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