| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1060 |
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| Symbol | |
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| ID | 3580052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1240459 |
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| End bp | 1241160 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 637684755 |
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| Product | orotidine-5'-phosphate decarboxylase |
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| Protein accession | YP_289121 |
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| Protein GI | 72161464 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCGCAC CCATCGCCGT CGCGCTCGAC GCCCCGGATG TGGAGACCGC TTCCCGCTGG
GCCGCCGCGG TCGCCCCGCA CGTCAGCACC CTGAAAGTCG GGCTGGAGCT GTACCTGCGC
TACGGGCCCG CGGTTGTGGA GGCCGTGCGC GGTGCGCGGG AGACCGCGCT GTTCCTCGAC
CTGAAACTGC ACGACATCCC CGCCACGGTC GCGGGCGCTG CCCGATCGGT GGCCGGGCTT
GCTCCGGCGT TCCTCACCGT GCATGCGGCC GGAGGCGCCG ACATGGTCCG CGCCGCGGTG
GAGGCGGCAC CCGAGACGCG GATCGCCGCG GTGACCGTGC TGACGTCGCT GGACGAGGCC
GCGCTCGGCG CGGTGGGGAT GCGCGGCCCG GCGAGGGACG CGGTGCGCCG GCTTGCGGTG
CTCGCAGTGG AGGCGGGGGC CCGGGCCTTG GTGTGCTCCC CGCAGGAGGC GGCTATGGTC
CGCGCCGAGG TCGGCCCGGA CGTCACGCTC ATCACCCCGG GGGTGCGGCC GGCCGGGGCC
GCCCAGGGGG ACCAGGCGCG GGTGGCGACT CCCGAGGCGG CGCTGGCGGC CGGGGCGGAC
CTGCTGGTCA TCGGACGGCC CATTACCCGC GCACCGGATC CGGGGGCGGC GGCTGCGGCG
CTCGCCGCAG AGCTCCAAAA AACCGGGGCG TCCCCCTCCT GA
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| Protein sequence | MAAPIAVALD APDVETASRW AAAVAPHVST LKVGLELYLR YGPAVVEAVR GARETALFLD
LKLHDIPATV AGAARSVAGL APAFLTVHAA GGADMVRAAV EAAPETRIAA VTVLTSLDEA
ALGAVGMRGP ARDAVRRLAV LAVEAGARAL VCSPQEAAMV RAEVGPDVTL ITPGVRPAGA
AQGDQARVAT PEAALAAGAD LLVIGRPITR APDPGAAAAA LAAELQKTGA SPS
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