Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1054 |
Symbol | pyrB |
ID | 3579606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1231196 |
End bp | 1232137 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637684749 |
Product | aspartate carbamoyltransferase catalytic subunit |
Protein accession | YP_289115 |
Protein GI | 72161458 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.38137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGCACC TGCTTTCCGC CGGAGACCTC ACCCGAGACG AGGCCCTGCT CATCCTCGAC ACCGCGCGGG AACTCTCCCA GGTCAGCGAA CGCTCCGTGA AGAAGCTGCC GACCCTGCGC GGCCGCACCG TCGTCAACCT GTTCTACGAA GACTCCACGC GCACCCGGAT CTCCTTCGAA GCCGCCGCCA AACGCATGTC GGCGGACGTC ATCAACTTCT CCGCCCGCGG CTCCAGCGTC TCCAAAGGAG AAAGCCTCAA AGACACCGCG CTGACCCTGC AGGCCATGGG CGCCGACGGG GTCGTCATCC GGCACAGCGC CCCCGGAGCG GCGCGCCGCC TCGCCGACTG GGTGGACGGC GTCGTCATCA ACGCCGGCGA CGGCACCCAC GAGCACCCCA CCCAGGCGCT GCTCGACGCC TACACCATGC GGGAACGGCT CGGCCGCGTC GAAGGCCTGC GGGTCGCCAT CGTCGGCGAC ATCCGGCACA GCCGCGTCGC CCGCTCCAAC GTGCTGCTGC TCACCACCCT CGGCGCCGAG GTCACCTTGG TCGCCCCGCC CACCCTGCTG CCCGTCTCCG TCGACACCTG GCCCTGCGCG GTCTCCTACG ACCTCGACGA AGTCCTGCCC AAGAGCGACG TCGTCATGAT GCTGCGGGTG CAGGCCGAGC GGATGCACTC CTCGTTCTTC CCCTCCGCGC GCGAATACAG CCGCCGCTAC GGCCTGGACG CCGACCGCCT GGCACGGATG GCCGACCACG CCATCGTCAT GCACCCGGGC CCCATGGTCC GCGGCATGGA GATCTCCGCG GAGGTCGCCG ACTCCGCCCG CTCCACCGTC ACCGAACAGG TGACCAACGG TGTCAGCGTC CGCATGGCCG TGCTGTACCT GCTGCTCGGC GGTGCCATCC ACAGACCGGG AAACCAGGGG GAGCCCCGAT GA
|
Protein sequence | MQHLLSAGDL TRDEALLILD TARELSQVSE RSVKKLPTLR GRTVVNLFYE DSTRTRISFE AAAKRMSADV INFSARGSSV SKGESLKDTA LTLQAMGADG VVIRHSAPGA ARRLADWVDG VVINAGDGTH EHPTQALLDA YTMRERLGRV EGLRVAIVGD IRHSRVARSN VLLLTTLGAE VTLVAPPTLL PVSVDTWPCA VSYDLDEVLP KSDVVMMLRV QAERMHSSFF PSAREYSRRY GLDADRLARM ADHAIVMHPG PMVRGMEISA EVADSARSTV TEQVTNGVSV RMAVLYLLLG GAIHRPGNQG EPR
|
| |