Gene Tfu_1046 details

Gene Information

• Locus tag: Tfu_1046
• Symbol: thiE
• ID: 3579598
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 1224203
• End bp: 1224859
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 637684741
• Product: thiamine-phosphate pyrophosphorylase
• Protein accession: YP_289107
• Protein GI: 72161450
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0352] Thiamine monophosphate synthase
• TIGRFAM ID: [TIGR00693] thiamine-phosphate pyrophosphorylase

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGACGAGA CTCTGCGAAA GCGGTTGGAA TCCGCCCGGC TCTACCTGTG CACGGACGCC 
CGCGCCGACC GAGGCGACCT GGCCGAGTTC CTTGATGCGG CGCTCGCCGG GGGCGTGGAC 
ATCGTGCAAC TGCGCGACAA GACCCTGGAC GCGCGGGACG AGCTCGCCGC GCTGGAAGTC 
GTGCGTGAGG CGTGCGACCG CCACGGGGCG CTGCTCGCGG TCAACGACCG GGCCGACATA 
GCCCACGCCG TCAACGCCGA CGTGCTGCAC CTGGGACAGC GGGACCTGCC CGTGCGCTAC 
GCCCGCGCGA TCCTCGGGGA CCGGCCGCTG ATCGGCCGCT CCACCAACGC GGCGGAGCTG 
TCTGCGGCCG CCGACCGGGA AGAAGGCGTC GACTACTTCT GTATCGGCCC GGTGTGGGCG 
ACCCCGACCA AACCGGGACG GCCCGCTGCC GGGCTCGACG AGGTGGCGCG GGTCGCCGCC 
CTGCACCCGC AGCGCCCCTG GTTCGCGATC GGCGGGATCA ACGAGGACAA CCTGGACCAG 
GTGCTGGCCG CGGGCGCCCG CCGGGCTGTC GTGGTCCGCG CCATCACCGA AGCCGAAGAC 
CCGCGTGCGG CGGCGGCGGA GCTCAAACGC CGCCTCGTGG CAGCGGCCGC AGCCTGA 

 

Protein sequence

MDETLRKRLE SARLYLCTDA RADRGDLAEF LDAALAGGVD IVQLRDKTLD ARDELAALEV 
VREACDRHGA LLAVNDRADI AHAVNADVLH LGQRDLPVRY ARAILGDRPL IGRSTNAAEL 
SAAADREEGV DYFCIGPVWA TPTKPGRPAA GLDEVARVAA LHPQRPWFAI GGINEDNLDQ 
VLAAGARRAV VVRAITEAED PRAAAAELKR RLVAAAAA