| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1016 |
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| Symbol | |
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| ID | 3579276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1190145 |
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| End bp | 1191836 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637684711 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_289077 |
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| Protein GI | 72161420 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACGA CGGTTGAGAC TCCGACGGCG ACCGTCCGGG CATCCGCCAC AGCTCGGCGG
GCCACCCCGG GCTCGAAAAT CGTCAGCTGG CTGACGACAA CCGATCACAA GGTGATCGGG
TACATGTACC TGATCACCTC GTTCGCATTC TTCCTGCTCG CCGGTGTCAT GGCGCTGCTG
ATCCGGGCCG AGTTGATGTA CCCGGGCATG CAGCTGATGA ACAACGAGAC CTACAACCAG
TTGTTCACCA TGCACGGCAC GATCATGCTG TTCCTGTTCG CGACGCCGCT GTTCGTCGGG
TTCGGGAACG TGCTGCTGCC GCTGCAGATC GGGTCACCCG ACGTGGCCTT TCCCCGGCTC
AACCTGTTCG GGTACTACCT GTTCCTGTTC GGCGGCCTGA TCGTGGTAGC CGGGTTCATC
ACGCCCGGCG GTGCGGCGAG CTTCGGCTGG TTCTCCTACG TGCCGCTCTC GGATGCGGTC
CGTTCCCCGG GGCTCGGTGG CGACCTGTGG ATCATGGGTC TGGCCATCAG CGGTCTGAGC
ACCATCCTCG GCTCGGTGAA CTTCATCACC ACGGTCGTGT GCATGCGCGC CCCCGGTATG
ACCATGTTCC GCATGCCGAT CTTCACGTGG AACGTGGTGC TCACCAGCGT GCTCGTGCTG
CTGGCCTTCC CGGTGCTCAC CGGTGCCTTC GCCGGGCTGG CGGCTGACCG CATCATCGGT
GCGCAGATCT TCAACCCCGA GCACGGCGGG CCGATCCTCT ACCAGCACCT GTTCTGGTTC
TTCGGCCACC CGGAGGTCTA CATCATCGCG CTGCCGTTCT TCGGCATCGT CACCGAGATC
CTCCCGGTGT TCAGCCGCAA GCCGATCTTC GGCTACAAGA GCCTGATCGG CGCCACCATC
GCGATCGCGG GACTCTCCAT CACGGTGTGG GCGCACCACA TGTTCCCCAC CGGCGCGGTG
CTGCTGCCGT TCTTCTCCTT CATGACCTTC CTCATCGCGG TGCCGACCGG CGTGAAGTTC
TTCAACTGGA TCGGCACCAT GTGGCGCGGC CAGCTCACCT TCGAGACGCC GATGCTGTTC
TCCATCGGCT TCATGACCAC CTTCCTGTTC GGTGGCCTCA CCGGTGTGAT CCTGGCCTCC
CCGCCGCTGG ACTTCCACGT CACCGACTCG TACTTCGTGG TGGCCCACTT CCACTACACG
GTGTTCGGCA CCGTGGTGTT CGCGATGTTC GCGGGCTTCT ACTTCTGGTG GCCGAAGTTC
ACCGGCAAGA TGCTCAACGA GAAGCTGGGC AAGCTCCACT TCTGGACGCT GTTCTTCGGC
TTCCACGGCA CCTTCCTCAT CCAGCACTGG CTGGGCGCGG AAGGCATGCC GCGCCGCTAC
GCGGACTACC TGCCGGCGGA CGGCTTCACG CTGCTCAACC AGATCTCCAC GGTCTCGTCC
TTCGTCCTCG GTGCGTCCAC CCTGTTCTTC CTGTGGAACG TCTGGACGAC CGCGAAGAAC
GCTCCGAAGG TGACCGTGGA CGACCCGTGG GGCTACGGCT GCTCGCTGGA GTGGGCGACC
TCCTGCCCGC CGCCGCGGCA CAACTTCGTC TCGCTGCCGC GGATCCGCTC TGAGCGGCCC
GCCTTCGACC TGCACCACCC GTACGCGGCG ACCCCCGCGG TCGCTGAGCC GGCCACGGCG
AGCACGAAGT AG
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| Protein sequence | MTTTVETPTA TVRASATARR ATPGSKIVSW LTTTDHKVIG YMYLITSFAF FLLAGVMALL
IRAELMYPGM QLMNNETYNQ LFTMHGTIML FLFATPLFVG FGNVLLPLQI GSPDVAFPRL
NLFGYYLFLF GGLIVVAGFI TPGGAASFGW FSYVPLSDAV RSPGLGGDLW IMGLAISGLS
TILGSVNFIT TVVCMRAPGM TMFRMPIFTW NVVLTSVLVL LAFPVLTGAF AGLAADRIIG
AQIFNPEHGG PILYQHLFWF FGHPEVYIIA LPFFGIVTEI LPVFSRKPIF GYKSLIGATI
AIAGLSITVW AHHMFPTGAV LLPFFSFMTF LIAVPTGVKF FNWIGTMWRG QLTFETPMLF
SIGFMTTFLF GGLTGVILAS PPLDFHVTDS YFVVAHFHYT VFGTVVFAMF AGFYFWWPKF
TGKMLNEKLG KLHFWTLFFG FHGTFLIQHW LGAEGMPRRY ADYLPADGFT LLNQISTVSS
FVLGASTLFF LWNVWTTAKN APKVTVDDPW GYGCSLEWAT SCPPPRHNFV SLPRIRSERP
AFDLHHPYAA TPAVAEPATA STK
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