| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1004 |
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| Symbol | |
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| ID | 3579264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1180252 |
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| End bp | 1181256 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637684699 |
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| Product | K+ channel beta subunit |
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| Protein accession | YP_289065 |
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| Protein GI | 72161408 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01293] voltage-dependent potassium channel beta subunit, animal |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0098418 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTCC GTCATCTCGG CAAGAGCGGA CTTGTTGTCA GCGAAATCGC CTACGGAAAC
TGGATCACCC ACGGCTCCCA GGTCGAAGAG GAGACGGCGA TAGCGTGCGT GCACGCTGCG
CTGGACGAGG GCATCACCAC GTTCGACACC GCCGACGTCT ACGCCCAGGG GCGTGCCGAG
GAGGTCTTGG GCAAGGCGCT CAAAGGGCAG CGCCGTGACG GCATCGAGAT CTTCTCCAAG
GTGTACTGGC CGGTGGGTCC GGGGAAGAAC GACCGGGGCC TGTCGCGCAA GCACATCATC
CGCGGGGTGG AGGAGTCGCT GCGCCGGTTG GGCACCGACT ACCTGGACTT GTACCAGGCG
CACCGGTTCG ACTACGCCAC CCCGTTGGAG GAGACGCTGC GCGCCTTCGA CGACTTGGTG
CGCCAGGGCA AGGTCCTCTA CGTGGGTGTC TCGGAGTGGC GTGCCGAGGA GATCGAGCAG
GCGCTGAAGA TCGCCGACGA GATGGGCTTC GACCGGATCG TGTCCAACCA GCCGCAGTAC
AACATGCTGT GGCGGGTGAT CGAAGCCGAA GTGGTGCCGC TGTGCAAGCG GGAAGGCATC
GGGCAGATCG TCTGGTCGCC GATCGCGCAG GGCGTGCTGA CCGGCAAGTA CAAGCCGGGG
CAGCCGCCGC CTTCCGGTTC TCGGGCCACG GACGAGAAGT CGGGTGCCCA GTTCATCCGG
AAGTTCCTCG ACAACCAGCA GTTGCTGGAG CGGGTGCAGC AGTTGCTGCC GCTGGCCGCG
GAGGCCGGGC TGACTCCGGC GCAGTTGGCG GTGGCGTGGG TGCTGCAGAA CTCGAACGTG
TCGGCGGCGA TCATCGGCGC GTCCCGGCCG GAGCAGGTGC GGGACAACGC CAAGGCGGCG
GGGGTGAAGC TCGACGCCGA GCTGATGCGC CGTATCGACG AGATCCTGGG GGACGCTGTT
GAGCGCGACC CGGCGCTGAC CGCGAGCCCG AAGGAGCGGC CGTAG
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| Protein sequence | MEFRHLGKSG LVVSEIAYGN WITHGSQVEE ETAIACVHAA LDEGITTFDT ADVYAQGRAE
EVLGKALKGQ RRDGIEIFSK VYWPVGPGKN DRGLSRKHII RGVEESLRRL GTDYLDLYQA
HRFDYATPLE ETLRAFDDLV RQGKVLYVGV SEWRAEEIEQ ALKIADEMGF DRIVSNQPQY
NMLWRVIEAE VVPLCKREGI GQIVWSPIAQ GVLTGKYKPG QPPPSGSRAT DEKSGAQFIR
KFLDNQQLLE RVQQLLPLAA EAGLTPAQLA VAWVLQNSNV SAAIIGASRP EQVRDNAKAA
GVKLDAELMR RIDEILGDAV ERDPALTASP KERP
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