| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1000 |
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| Symbol | |
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| ID | 3579260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1175505 |
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| End bp | 1176755 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637684695 |
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| Product | phosphoesterase YhaO-putative DNA repair exonuclease |
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| Protein accession | YP_289061 |
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| Protein GI | 72161404 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTGC TCCACGCCGC TGATCTGCAC ATCGACAGTC CACTGCGGGG CCTTTCCCGG
TACGAGGGGG CCCCGGCCGA CCAGTTGCGC GGGGCGACAC GGCAGGCTTT GGAGAACCTG
GTGACTCTCG CCTTAGAGGA GGAGGTCACC GCGGTGCTGC TCGCCGGGGA CATCTACGAC
GGGGACTGGC CCGACTACAA CACCGGGCTG TTCTTCACCC GGCAGATGAC CCGGCTGTGC
GACGCCGGCA TCCCGGTGTA TTTGATCGCG GGCAACCACG ACGCGGCGAA CCTGATGACG
CGGACGCTGA CCGCTTCCCT GCCGAAGAAT GTGCACTACT TTCCCACGGA GCGCCCCGCC
ACGGTGGTCG ACGAGCAGCG CGGGCTCGCC GTCCACGGCC AGGGGTTCGC CCAGCGGGAG
GTCAGGGCGA ACCTGGCCGA ACACTATCCC GCGCCGCGGT CCGGCTTGTT CAACGTCGGC
CTGCTGCACA CTGCGCTCAC CGGTCGAGAA GGACACGAGC CGTACGCCCC GTGCCGTATC
GACCAGTTGG TCGACCACGG CTACGAGTAC TGGGCGCTGG GCCACGTCCA CCAGCGGCAG
GTGGAATACG ACGCCGACGT CAAAGTGGTG TTCCCGGGGA ACATTCAGGG GCGGAACGTC
CGCGAGGCCG GGCCTAAAGG CTGCACGCTG GTCACCGTGG ACGACCGCCA CCGGGTGACA
GGGCTGCGCC ACCACGACCT CGACACGGCG GCTCGCTGGC ACGAGCTGCG GGTGGATGTG
CGCAGCGCCC GCGATGTATC CGACGTGCTC ACCCTGGTCT CCGAGCAGCT CGACAAGGAG
CTGGCCGGGG ACACCGAACC CAACCGCGTC CACGCGGTGC GGGTGGTGGT CGAAGGCCCC
ACGGACGCCC ACGAGCAGTT GCACCGCGAC CACGAGAAGC TGTTGAACGA GCTGCGCGCT
ATCGCCGCGC AGCGCCCGGA CACCTGGTTG GAGAAGCTCC GGGTGAAGAC GTCTCCCCCT
GAGGAGCGTC TCGACGCCGC CCACGCGGAC GAGCTGGTCG GTGAGCTGTG GCGGACCGCG
GCCCGGCTCT CCGCATCCCC GGAGCAGCTC ACCGAGGTCA TCGCGTCGGC CGAACTGCTG
GGCAAACTGC CTCTTCAGCT GCGGGAAGAG CTGAGCGACC CGCAGCGGCA GCGCGACCTG
TTGGCGGAGG CGGTGGAGCT GCTGGCCGCT GAGCTGGGGG GTGCGCAGTG A
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| Protein sequence | MKLLHAADLH IDSPLRGLSR YEGAPADQLR GATRQALENL VTLALEEEVT AVLLAGDIYD
GDWPDYNTGL FFTRQMTRLC DAGIPVYLIA GNHDAANLMT RTLTASLPKN VHYFPTERPA
TVVDEQRGLA VHGQGFAQRE VRANLAEHYP APRSGLFNVG LLHTALTGRE GHEPYAPCRI
DQLVDHGYEY WALGHVHQRQ VEYDADVKVV FPGNIQGRNV REAGPKGCTL VTVDDRHRVT
GLRHHDLDTA ARWHELRVDV RSARDVSDVL TLVSEQLDKE LAGDTEPNRV HAVRVVVEGP
TDAHEQLHRD HEKLLNELRA IAAQRPDTWL EKLRVKTSPP EERLDAAHAD ELVGELWRTA
ARLSASPEQL TEVIASAELL GKLPLQLREE LSDPQRQRDL LAEAVELLAA ELGGAQ
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