Gene Tfu_0999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0999 
Symbol 
ID3579012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1172005 
End bp1175508 
Gene Length3504 bp 
Protein Length1167 aa 
Translation table11 
GC content73% 
IMG OID637684694 
Producthypothetical protein 
Protein accessionYP_289060 
Protein GI72161403 
COG category[S] Function unknown 
COG ID[COG4717] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.497545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGATCG AACGCCTGGA CCTGCTGGCT TTCGGACCGT TCACCGATTT GTCGTTGCCG 
CTGGGCGCCC CCGGGGTGCA CATCGTCTAC GGCCCTAACG AAGCGGGGAA GAGCACCGCG
CTGCGCGCGC TCCACGACCT GTTCTACAAG ATTCCTAAAC AGACCCCCTA CGACTTCGTG
CACGACAAAC CGGACATGAA GCTGCGGGCT GTGGTCCGCA GCGACGACGG CAGGGTCGTG
GAGTTCGTCC GCCACAAGCG CGACAAGAAC TCGTTGACTG ATCCGCGGGG GAATCCGCTG
GATGAGAGCG TGGTGCAGCG GCTGCTGGGC GGGGTGAGCA GCTCGACGTT CCTCTCCATG
TTCGCGCTCA CTCTCGAGGA GCTTGAGCGC GGCGGGGAGT CGCTGTTGGA AGGGGGCGGC
GACGTCGGTG AAGCGTTGCT GTCCGCTCGC GCCTACCCCC AGTTACGCGC TTTGGTGGAA
CGGCTGAGAA AGCAGCGGGA CGCGCTGTTC CGCCCGCAGG GGAGGCGGGG GCCGACGATC
AACAAGGAGC TGGGCGAATA CCAGGATCTG AACAGGAGGA TCGGGGAGGC GCAGCTTCGT
ATTGCGGACT ACCGGCGCAG GCTGGCCGCC GTTGCGGAAC AGCGGCAGCG GGAAAAGGAC
CTGGACCAGA AGCTGGCGTC CCTCCGTGAG GAGCAGAAAC GGTGGACCGC CCTGCAGCAG
GCGCTTCCTG CCTTGCACAC GCGTGCTCAG CAGGTGCGGC GGATCGCGGA GCTGGAAGCC
GAGGGCCCGC TCGCCCCCCT GGATTTCGCC GACCGGCTCC CCCGTTTGGA GGAGCAGTCC
CGTGCTGCCG AGGAGACGCT CGCGGACAGC ACGGCCGAGC TCGCGGCCAA GCAGGAGGAG
CTGGACCGGC TGGTGGTGGA TGCGCGCCTG CTGGACGCGG CCCCGGAGGT GGAGCGGCTG
GCCCGTTCCC GGGAGCGGAT CGAAGCCGAC GAAGAGCGGC TCGCTGCGTT GGAACGCCAG
GCGGCGCGCC TGCGGGAGGA GGCGCGGGAG ATCCTGCAGG AGGTGCGCCC CGACCCGGCC
GGGGCGGACG GTCCCGCGGT GCCTGCCGTG GACCAGGCCA CGCGGAACCG GGTGAGGGAG
CTCGCGGACG CTTATGCCGA CCTGCTTCCC CGCGTGGAGG AGGCCCGCGG GGAGGTGGCG
CAGCAGCGCC GCCGCCACAC CGCCGAGCAG GAGCGGTTGG ACGCGCTGCC TGACCCGGGC
GACAGCGCTG CGCTGGCTGC CGCGTTGGAT GCGCTGCCTG CCACGCTGTT CGACGAGATG
ACTGCCGCGG CCGACACGGT GCATGAGACC GCCGCTGCCT TGGAGCGCAT CGCACGGGAC
GCGGGCTGGG ATCCCGCGGA CTGTGCCGCG TTGGCTGCCG CGCACGCCCC GCTGCGGGAC
CAGGTGGTCG CCTACCGGCG GCGCGCGGAC GAGCATGCGC AAACACAGCG GCGCGCCGAC
GAGGAGTGCG CCCAGGTGCG TGCGGAGCTG ACGCGGGAAC GGCTCCGGTT GGCAGAGCTC
ACCCAAGACG AGACGGTTCC CACCGAGGAG GCGTTGGCGG AGGCCCGCCG GCAGCGGGAC
GCGCTGTGGC AGCGGGTCCG CGACGGCTCG GATGCGGAGG CGGCGGACGC CTACGAGCGC
GCGGTCCGCG ACGCGGACGA GCTCGCTGAT CGGGCTTTGG CCGGGGCGCA GCGGATCGCG
GAACGCCAGC AGGCCCGGCA GCAGATCACC GTGTTGGAGC ACCGCTTGGC GCTGGCGGAG
CGCGAGGCCG CGGCCGCGCG TGCGGCCGGG GAGGAGCTCG CGGCGCAGTG GCAGGCGTTG
TGGCCTGACC CGCTGCTGCC TGCCCCGGAC GTGGATGCGG CAGAAACGGT GCTGGACCGG
CTCGCCGAGC TGCGCAGACG CCAGGAGGAG CATACGGCGG CCTGCCGCAA GCTGGCGGAT
CGCCGGGAGC GGGCCGCGGC CCACGCCGAC CAGTTGCGCC GGGCGCTCCG CGACGCGGGG
GCCGAGGTTC CGGAGGCTGC GGAGGACGCG GACGTGGAGG CGGTGGTGCG GGAGCTGCGG
GAGCGGGCCG CCGCGGAACG CGCCCGCCGC GAGCAGGCCG CGCAGGAGCG CGCCGACCAG
GAGCGGACCG TCCAGGAGGC GAAACGGTCC CTGGTGGAGG CCGAGGCGAA GCTGGACGCG
GTCACCGAGC GGTTGCGCGC CTGGGAGGAG GAGTGGCGCA CGGTTGTGGC GTCGGTGCCC
GTGTCCGGGG ACCGGCTGCC TAAGGAGGTG CTGCACGACC TCGACCAGTG CGCGGAGGCG
GCGTCCCGGC TCGCCGAGGC CGACCAGCGG GCCGCGGAGG CGGAGGAGCT GCGCGAGCAG
ATCGCTGCTT TCCACGACCG GGTGGGCGCG GTGCTCGAGG CCTGCGGCCT GCCCGTGCCG
GACAGTGCTG CCCAGCGGCA CGCTGCCCTG GACGCGCTGC GGCACCGGGT GGCGGAGAAC
AGCGCGCAGG AGCAGCGGCG CCAGGCGCTG AGTGAGGAGG TGGAGGCGCT CCGCGGGAAG
GCGCGCAGCG CCCAGGCCCG GTTGGAGGCG GTGGAAGCCG AGTGCGCGCA GATGTGCCAG
GAGACGGGCG TCGATTCGGT TGCGGAGCTG CGGGCGGCGA TCGACCGCGC CCAGCAGGTG
CGGGAGCTGC GGCACGATGT GGCGCTGGTG GAGCGGTCGC TCGCCGAGTC GTGGCCGGGC
GGGGTCGCGG AGGCGGAGCA GGCTGCGGCC GGGGTCGACC GGGAGGAGCT GGCGGGCCGT
CTGGCAGAGC TGGGCCAGGA GATTGCCGCG GCGGAGGAGG AGCATCGCGC CGCGGTGCGC
GACTTGGCTG AAGCGGAGCG GGAGCTGGGG GAGGCTGACG GGTCGGCGCT GGCCGCGCAG
GCCGCCCAGG AGCGGGAGGA GGTGCTGGCC CGGATCGCCC AGAACGCGGA GACCCATACG
CGGCTGGTGC TCGCGCACAC GCTGCTGCTG CGGTGCATCG AGGAGTACCG GCAGGCCCAC
CAGGGCCCGC TGCTGCGCCG GGCCGAGGAG CTGTTCCGGC AGCTCACCGT GGGCCGGTTC
CGCGAGTTGC AGACGGAGAC AGCCGACGAC GGCACGACCG TGCTGCGGGT CCGCCGCGCC
ACGGGGAAGC TGGTGGACAT GGGGGCGTTG AGCGAGGGCA CCCGGCACCA GCTCTATCTG
GCGCTGCGGT TGGCGACCGT GGAGCACTAT GCGGCCGAGC ACCAGTCCAT GCCGTTCGTG
CTCGACGACG TGTTCATGAC GTTCGACGAC GAGCGGGCTG CGGCCGGGCT GCGGGTGCTG
GAGTCGGTGG CGGACCGGGT CCAGCCGGTG GTGTTGACCC ACCACGCCCA CCTGGCTGAG
CTGGCCCGCG ACGTGCTGCC GGAGGACCGG GTGCACGTCC ACCGCTTGCC GCGGTTCACC
CACGCGGAAC GCGTGACCGT GTGA
 
Protein sequence
MRIERLDLLA FGPFTDLSLP LGAPGVHIVY GPNEAGKSTA LRALHDLFYK IPKQTPYDFV 
HDKPDMKLRA VVRSDDGRVV EFVRHKRDKN SLTDPRGNPL DESVVQRLLG GVSSSTFLSM
FALTLEELER GGESLLEGGG DVGEALLSAR AYPQLRALVE RLRKQRDALF RPQGRRGPTI
NKELGEYQDL NRRIGEAQLR IADYRRRLAA VAEQRQREKD LDQKLASLRE EQKRWTALQQ
ALPALHTRAQ QVRRIAELEA EGPLAPLDFA DRLPRLEEQS RAAEETLADS TAELAAKQEE
LDRLVVDARL LDAAPEVERL ARSRERIEAD EERLAALERQ AARLREEARE ILQEVRPDPA
GADGPAVPAV DQATRNRVRE LADAYADLLP RVEEARGEVA QQRRRHTAEQ ERLDALPDPG
DSAALAAALD ALPATLFDEM TAAADTVHET AAALERIARD AGWDPADCAA LAAAHAPLRD
QVVAYRRRAD EHAQTQRRAD EECAQVRAEL TRERLRLAEL TQDETVPTEE ALAEARRQRD
ALWQRVRDGS DAEAADAYER AVRDADELAD RALAGAQRIA ERQQARQQIT VLEHRLALAE
REAAAARAAG EELAAQWQAL WPDPLLPAPD VDAAETVLDR LAELRRRQEE HTAACRKLAD
RRERAAAHAD QLRRALRDAG AEVPEAAEDA DVEAVVRELR ERAAAERARR EQAAQERADQ
ERTVQEAKRS LVEAEAKLDA VTERLRAWEE EWRTVVASVP VSGDRLPKEV LHDLDQCAEA
ASRLAEADQR AAEAEELREQ IAAFHDRVGA VLEACGLPVP DSAAQRHAAL DALRHRVAEN
SAQEQRRQAL SEEVEALRGK ARSAQARLEA VEAECAQMCQ ETGVDSVAEL RAAIDRAQQV
RELRHDVALV ERSLAESWPG GVAEAEQAAA GVDREELAGR LAELGQEIAA AEEEHRAAVR
DLAEAERELG EADGSALAAQ AAQEREEVLA RIAQNAETHT RLVLAHTLLL RCIEEYRQAH
QGPLLRRAEE LFRQLTVGRF RELQTETADD GTTVLRVRRA TGKLVDMGAL SEGTRHQLYL
ALRLATVEHY AAEHQSMPFV LDDVFMTFDD ERAAAGLRVL ESVADRVQPV VLTHHAHLAE
LARDVLPEDR VHVHRLPRFT HAERVTV