Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0999 |
Symbol | |
ID | 3579012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 1172005 |
End bp | 1175508 |
Gene Length | 3504 bp |
Protein Length | 1167 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637684694 |
Product | hypothetical protein |
Protein accession | YP_289060 |
Protein GI | 72161403 |
COG category | [S] Function unknown |
COG ID | [COG4717] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.497545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGATCG AACGCCTGGA CCTGCTGGCT TTCGGACCGT TCACCGATTT GTCGTTGCCG CTGGGCGCCC CCGGGGTGCA CATCGTCTAC GGCCCTAACG AAGCGGGGAA GAGCACCGCG CTGCGCGCGC TCCACGACCT GTTCTACAAG ATTCCTAAAC AGACCCCCTA CGACTTCGTG CACGACAAAC CGGACATGAA GCTGCGGGCT GTGGTCCGCA GCGACGACGG CAGGGTCGTG GAGTTCGTCC GCCACAAGCG CGACAAGAAC TCGTTGACTG ATCCGCGGGG GAATCCGCTG GATGAGAGCG TGGTGCAGCG GCTGCTGGGC GGGGTGAGCA GCTCGACGTT CCTCTCCATG TTCGCGCTCA CTCTCGAGGA GCTTGAGCGC GGCGGGGAGT CGCTGTTGGA AGGGGGCGGC GACGTCGGTG AAGCGTTGCT GTCCGCTCGC GCCTACCCCC AGTTACGCGC TTTGGTGGAA CGGCTGAGAA AGCAGCGGGA CGCGCTGTTC CGCCCGCAGG GGAGGCGGGG GCCGACGATC AACAAGGAGC TGGGCGAATA CCAGGATCTG AACAGGAGGA TCGGGGAGGC GCAGCTTCGT ATTGCGGACT ACCGGCGCAG GCTGGCCGCC GTTGCGGAAC AGCGGCAGCG GGAAAAGGAC CTGGACCAGA AGCTGGCGTC CCTCCGTGAG GAGCAGAAAC GGTGGACCGC CCTGCAGCAG GCGCTTCCTG CCTTGCACAC GCGTGCTCAG CAGGTGCGGC GGATCGCGGA GCTGGAAGCC GAGGGCCCGC TCGCCCCCCT GGATTTCGCC GACCGGCTCC CCCGTTTGGA GGAGCAGTCC CGTGCTGCCG AGGAGACGCT CGCGGACAGC ACGGCCGAGC TCGCGGCCAA GCAGGAGGAG CTGGACCGGC TGGTGGTGGA TGCGCGCCTG CTGGACGCGG CCCCGGAGGT GGAGCGGCTG GCCCGTTCCC GGGAGCGGAT CGAAGCCGAC GAAGAGCGGC TCGCTGCGTT GGAACGCCAG GCGGCGCGCC TGCGGGAGGA GGCGCGGGAG ATCCTGCAGG AGGTGCGCCC CGACCCGGCC GGGGCGGACG GTCCCGCGGT GCCTGCCGTG GACCAGGCCA CGCGGAACCG GGTGAGGGAG CTCGCGGACG CTTATGCCGA CCTGCTTCCC CGCGTGGAGG AGGCCCGCGG GGAGGTGGCG CAGCAGCGCC GCCGCCACAC CGCCGAGCAG GAGCGGTTGG ACGCGCTGCC TGACCCGGGC GACAGCGCTG CGCTGGCTGC CGCGTTGGAT GCGCTGCCTG CCACGCTGTT CGACGAGATG ACTGCCGCGG CCGACACGGT GCATGAGACC GCCGCTGCCT TGGAGCGCAT CGCACGGGAC GCGGGCTGGG ATCCCGCGGA CTGTGCCGCG TTGGCTGCCG CGCACGCCCC GCTGCGGGAC CAGGTGGTCG CCTACCGGCG GCGCGCGGAC GAGCATGCGC AAACACAGCG GCGCGCCGAC GAGGAGTGCG CCCAGGTGCG TGCGGAGCTG ACGCGGGAAC GGCTCCGGTT GGCAGAGCTC ACCCAAGACG AGACGGTTCC CACCGAGGAG GCGTTGGCGG AGGCCCGCCG GCAGCGGGAC GCGCTGTGGC AGCGGGTCCG CGACGGCTCG GATGCGGAGG CGGCGGACGC CTACGAGCGC GCGGTCCGCG ACGCGGACGA GCTCGCTGAT CGGGCTTTGG CCGGGGCGCA GCGGATCGCG GAACGCCAGC AGGCCCGGCA GCAGATCACC GTGTTGGAGC ACCGCTTGGC GCTGGCGGAG CGCGAGGCCG CGGCCGCGCG TGCGGCCGGG GAGGAGCTCG CGGCGCAGTG GCAGGCGTTG TGGCCTGACC CGCTGCTGCC TGCCCCGGAC GTGGATGCGG CAGAAACGGT GCTGGACCGG CTCGCCGAGC TGCGCAGACG CCAGGAGGAG CATACGGCGG CCTGCCGCAA GCTGGCGGAT CGCCGGGAGC GGGCCGCGGC CCACGCCGAC CAGTTGCGCC GGGCGCTCCG CGACGCGGGG GCCGAGGTTC CGGAGGCTGC GGAGGACGCG GACGTGGAGG CGGTGGTGCG GGAGCTGCGG GAGCGGGCCG CCGCGGAACG CGCCCGCCGC GAGCAGGCCG CGCAGGAGCG CGCCGACCAG GAGCGGACCG TCCAGGAGGC GAAACGGTCC CTGGTGGAGG CCGAGGCGAA GCTGGACGCG GTCACCGAGC GGTTGCGCGC CTGGGAGGAG GAGTGGCGCA CGGTTGTGGC GTCGGTGCCC GTGTCCGGGG ACCGGCTGCC TAAGGAGGTG CTGCACGACC TCGACCAGTG CGCGGAGGCG GCGTCCCGGC TCGCCGAGGC CGACCAGCGG GCCGCGGAGG CGGAGGAGCT GCGCGAGCAG ATCGCTGCTT TCCACGACCG GGTGGGCGCG GTGCTCGAGG CCTGCGGCCT GCCCGTGCCG GACAGTGCTG CCCAGCGGCA CGCTGCCCTG GACGCGCTGC GGCACCGGGT GGCGGAGAAC AGCGCGCAGG AGCAGCGGCG CCAGGCGCTG AGTGAGGAGG TGGAGGCGCT CCGCGGGAAG GCGCGCAGCG CCCAGGCCCG GTTGGAGGCG GTGGAAGCCG AGTGCGCGCA GATGTGCCAG GAGACGGGCG TCGATTCGGT TGCGGAGCTG CGGGCGGCGA TCGACCGCGC CCAGCAGGTG CGGGAGCTGC GGCACGATGT GGCGCTGGTG GAGCGGTCGC TCGCCGAGTC GTGGCCGGGC GGGGTCGCGG AGGCGGAGCA GGCTGCGGCC GGGGTCGACC GGGAGGAGCT GGCGGGCCGT CTGGCAGAGC TGGGCCAGGA GATTGCCGCG GCGGAGGAGG AGCATCGCGC CGCGGTGCGC GACTTGGCTG AAGCGGAGCG GGAGCTGGGG GAGGCTGACG GGTCGGCGCT GGCCGCGCAG GCCGCCCAGG AGCGGGAGGA GGTGCTGGCC CGGATCGCCC AGAACGCGGA GACCCATACG CGGCTGGTGC TCGCGCACAC GCTGCTGCTG CGGTGCATCG AGGAGTACCG GCAGGCCCAC CAGGGCCCGC TGCTGCGCCG GGCCGAGGAG CTGTTCCGGC AGCTCACCGT GGGCCGGTTC CGCGAGTTGC AGACGGAGAC AGCCGACGAC GGCACGACCG TGCTGCGGGT CCGCCGCGCC ACGGGGAAGC TGGTGGACAT GGGGGCGTTG AGCGAGGGCA CCCGGCACCA GCTCTATCTG GCGCTGCGGT TGGCGACCGT GGAGCACTAT GCGGCCGAGC ACCAGTCCAT GCCGTTCGTG CTCGACGACG TGTTCATGAC GTTCGACGAC GAGCGGGCTG CGGCCGGGCT GCGGGTGCTG GAGTCGGTGG CGGACCGGGT CCAGCCGGTG GTGTTGACCC ACCACGCCCA CCTGGCTGAG CTGGCCCGCG ACGTGCTGCC GGAGGACCGG GTGCACGTCC ACCGCTTGCC GCGGTTCACC CACGCGGAAC GCGTGACCGT GTGA
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Protein sequence | MRIERLDLLA FGPFTDLSLP LGAPGVHIVY GPNEAGKSTA LRALHDLFYK IPKQTPYDFV HDKPDMKLRA VVRSDDGRVV EFVRHKRDKN SLTDPRGNPL DESVVQRLLG GVSSSTFLSM FALTLEELER GGESLLEGGG DVGEALLSAR AYPQLRALVE RLRKQRDALF RPQGRRGPTI NKELGEYQDL NRRIGEAQLR IADYRRRLAA VAEQRQREKD LDQKLASLRE EQKRWTALQQ ALPALHTRAQ QVRRIAELEA EGPLAPLDFA DRLPRLEEQS RAAEETLADS TAELAAKQEE LDRLVVDARL LDAAPEVERL ARSRERIEAD EERLAALERQ AARLREEARE ILQEVRPDPA GADGPAVPAV DQATRNRVRE LADAYADLLP RVEEARGEVA QQRRRHTAEQ ERLDALPDPG DSAALAAALD ALPATLFDEM TAAADTVHET AAALERIARD AGWDPADCAA LAAAHAPLRD QVVAYRRRAD EHAQTQRRAD EECAQVRAEL TRERLRLAEL TQDETVPTEE ALAEARRQRD ALWQRVRDGS DAEAADAYER AVRDADELAD RALAGAQRIA ERQQARQQIT VLEHRLALAE REAAAARAAG EELAAQWQAL WPDPLLPAPD VDAAETVLDR LAELRRRQEE HTAACRKLAD RRERAAAHAD QLRRALRDAG AEVPEAAEDA DVEAVVRELR ERAAAERARR EQAAQERADQ ERTVQEAKRS LVEAEAKLDA VTERLRAWEE EWRTVVASVP VSGDRLPKEV LHDLDQCAEA ASRLAEADQR AAEAEELREQ IAAFHDRVGA VLEACGLPVP DSAAQRHAAL DALRHRVAEN SAQEQRRQAL SEEVEALRGK ARSAQARLEA VEAECAQMCQ ETGVDSVAEL RAAIDRAQQV RELRHDVALV ERSLAESWPG GVAEAEQAAA GVDREELAGR LAELGQEIAA AEEEHRAAVR DLAEAERELG EADGSALAAQ AAQEREEVLA RIAQNAETHT RLVLAHTLLL RCIEEYRQAH QGPLLRRAEE LFRQLTVGRF RELQTETADD GTTVLRVRRA TGKLVDMGAL SEGTRHQLYL ALRLATVEHY AAEHQSMPFV LDDVFMTFDD ERAAAGLRVL ESVADRVQPV VLTHHAHLAE LARDVLPEDR VHVHRLPRFT HAERVTV
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