Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0987 |
Symbol | |
ID | 3579000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1159180 |
End bp | 1159503 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637684682 |
Product | small multidrug resistance efflux protein |
Protein accession | YP_289048 |
Protein GI | 72161391 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.25874 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTGGC TGCTCCTCAT CGGTGCGATC CTCACCGAAG TCACCGGAAC CATCTCACTC CGGCTCTCCG ACGGGTTCAC CCGTCTCGTG CCGTCCCTCA TCGCGCTCAC CAGCTACGGG ATCGCGTTCA CCCTGCTCGC CCAAGTCCTC AAACTCGGCA TGGGCGTCGG CGTGGCCTAC GGCATCTGGT CGGCGCTGGG CGTCACCCTC GTCGCGGTCA TCGGCGCCGT GTTCCTCGGC GACACCCTCA CCTGGGTCCA GATCGTCGGC ATCGTCCTCG TCATCGCGGG CGTCGCCGCC CTCGAACTCG GCGCGGCCCG CTAG
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Protein sequence | MQWLLLIGAI LTEVTGTISL RLSDGFTRLV PSLIALTSYG IAFTLLAQVL KLGMGVGVAY GIWSALGVTL VAVIGAVFLG DTLTWVQIVG IVLVIAGVAA LELGAAR
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