| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0940 |
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| Symbol | |
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| ID | 3579396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1106378 |
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| End bp | 1109611 |
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| Gene Length | 3234 bp |
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| Protein Length | 1077 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637684635 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_289001 |
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| Protein GI | 72161344 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGACAC GAGCGACAAA CAACGGCGCT GACGCCAAGG ACGACGCGCC GGAGCAGGCC
GAGAAGACAG AGACCACGGC CAAGCGCCCC GCCAGACGGT GGGACCCCAG GAACTGGCGC
GTCCGTTCCC GGTTGGTGGC GCTCGTTGTC GTCCCCACCG CGGCCGCGCT GATTCTGGGA
GTCGTCAGAT TCTCCGAGAG CGCCCTGAAC ACGTTCCGGA ACGAGCGCAC CGAGGCGATG
GTGACGCTCG CCGAGGACAT CGTGCAGTTG GGCAACGAGC TCGGTAAGGA GCGCATGCTC
GTTGCCGCCT ACATCGCCGA CAACCCCAAC CCCACGCGGC GCTCCAACGA TCGCGCGGTC
GCGCTGCAAG AGCAGCAGAA GATCGTTGAC CAAGAGCTCA ACGACGTCCG TGCAGGAGCG
AACGAACTAG GCACCCCCTC CGACCCGCTC GTCAAGGAGC GGCTCGACAT CATGCTCGAC
TCCTTGGAGA AACTGAACGG GGTGCGGGAG GAGGTCACCA GCACCAGGGT CACGATGCTT
CCGGCGGTCA CCAAGTACCG CCAGATCATC TCCACGCTCA CCGACTTTGT GGAGACGCTG
GCCAACGCCA CCAACACCTC TTCGGAGCTG CGGGAGAGCG TCCGTGCGCT CAGCGCGCTC
GGCCGGGCCC GGGACGACCA GTCCTACGAG GCCGCGCTCA TGGTGCACTC CCTGATCCGC
GACTCGATGT CCGGCGGTGT GCAGGACTCG ATTGAGAGCA CCCAGGCGCG CTACAACAAC
GAGATCCGCA ACTTCCGCAA CAGCGCGACC CCCGCGCAGG AGGCGCTGCT CGACGAGAAC
TACGGAGGCT TGGACGTCAG CCGGCTGGGC ACCATGCGGC TGCGTGCCCT GCTGCGGGCC
GATGAAGGCC AGCCGCTGAC GGGGATCACG GACGGGGACG ACGCGGACAG CTACCAGCAG
ACGGCCCTCA GCGCTCTGGA CACGCTGGCC AAGGTGGAGA GCTCCCTGGC CAGGATGGTG
CGCGCCGAGG CGACCGCCCA CAAGGAGCAG GGCCGCAGGC TGCTGCTCTT CGACAGCATC
ACGGTGCTCT TCGTCGTCGT CTTCGTCTTC TTGACGACCT CGTGGGTGGC GCGCAGCATG
GTGATCCCGC TGCGGGTCCT GCGGGACGGC GCGATGCGGA TCGCCGCGAA GGACCTGCCC
GAAGCGATCG TCCGGATGCG CGAGACGAAC GTGCGTCCAG AAGAGGTGAA GATTACCCCG
CTCGAAGTCG ACTCCTCCGA CGAGTTCGGC GAGGTGGCCC GCTCCTTCGA CGAGGTGCAC
CGCTCCGCGC TGCGGCTGGC TGCTGACGAG GCCGCCCTGC GGGCCAACGT CAACGCGATG
TTCGTGAACC TATCGCGGCG GAGCCAGAGC CTGGTGGAGC GGCAGCTGCG CCTTATCGAG
CACCTGGAGC AGAGCGAGCA GGACGAAGAG CGTCTGGCAG AGCTGTTCCA GCTCGACCAC
TTGGCCACCC GCATGCGCCG CAACAACGAG AACCTGCTGG TCCTCTCCGG GCAGGACAAC
ACCCGCAAGT GGGCCCAGCC GGTTCCGCTG GTCGACGTGC TGCGGGCCGC GGTCTCCGAG
GTGGAGCAGT ACGCGCGGGT CAACGTGCGC GCCCCCTCCC ACGTGTCGGT GCTGGGCCGC
CCAGTCAACG ACGTCATCCA CCTCATCGCC GAGCTGGTGG AGAACGCCAC CGTGTTCTCC
GCGCACGACA CCCAGGTGTC GGTGACCGCG CAGGCTGTCG ACAACGGCGA CATCATCATC
GAGATCACCG ACTCGGGTAT CGGTATGTCG GCCGAGGAGC TGGAGAGCGC CAACCAGAAG
CTCGCCGAGC CTCCGGTGAT CGACGTTGCG GTCTCCCGCC GCATGGGTCT GTTCGTGGTG
AGCCGCCTGG CCAACCGGCA CGGTATCGAG GTGCGGCTGC GTCCGGCGCA CAACGGCGGT
ATCACTGCCG CGGTGCGGCT GCCCAACGAC CTGCTCATCA CCCCGGTCGA GCCGACGCCT
CCGGCGCTCA CCTCGGGGCG TGGCACCACT GTTCCGGACA CGTACGCCGA GGCGACCGCG
GCGTTCGCGT CGTCGCCGGC TCCGGCGGAT CCCGCGGACA GCGTGTGGGA GCCGCGTACC
AGCAACGACC GCCCGGTGTG GGAGCCGCGC ACAACCCCCT CGGGGCTGCC GAAGCGGCCC
GACCCGGCGA CCCGTGCCGC CCAGCAGGGC CAGCAGACCC CGCCGGAGCA CCCGCCGAGC
GGCGAGGACC TGTGGGACGC GGGATGGAAG CGGTCGGTGT CCCGCACCAC TTCCCCCCAA
CCGGTGGCGG ACCGTCCGGA GACGCCGCGC ACGGAAACCC CGCGTCCGGA GACCCCGCGT
CCGGAGACCC CGCGGACCGA GACTCCGCGC ACGGAGAGCC CGGCGGACAC CACGTCGACG
TCGGCGATAC CGACGGTGTC CGATTCGCGT CCGTCTGCTG CGGACACCGT GGGATCGTCC
CGCACCGGCG GGCAGAGCGT CTACGGCTAC TCCCTGGACC GGCCGGGACA GCGCTCCGCT
CACCCGCTCG GGGACACGCG CAGCAGCACC TCGGAGCGGC AGGGCTGGCA GCAGAATCCG
CTGTCGTCGT CCTACTCCAG CGGTAGCGGC CGCACCGAGC AGCCCGAGGT GCGGGAGGGC
TACGGATCCA CCGCCTACCT GTCCAAGCGG TACGGCCCGG GAAGCGGAAA CCAGAACACG
ATCATTCCGC CGTCCCCGGA GCACGAGTCC AACGAGCCGC TGCCGATCTT CGACTCCATC
GAGTCGAACT GGTTCCGTCG CCGCACAGTG CGTCCGGCGG TGACGACGAC GGAAACCGGT
CCGATCAGCG CCGTCAGCAC GCCCGACGGG CTGGGCACCG AGCCTGCTGC TCCTGCTCAG
CAGCAGAGCC AGCAGCCCCG CCCCGAGGAC GAGTGGCGTT CGGCTGCGGA CGCCGGTTGG
AAGACCGCGG CGGAACGGGC CAGTGCACCG ATTGCGGGTG GCATTACCGC CTCGGGCCTG
CCGAAGCGGA TTCCGCGCGC GAACCTGGTG CCGGGTGCTG CTCCGGCTCC GGAGAACTTC
AAGCAGATCA CGTCGCGCTC CGCGGAGCGG GTGCGCAGCC GGTTCTCCAG TTTCCAGCAG
GGCATCCGTC AGGGACGCGA CGCCCTGAAC AAGCGCTCGT CCCAGGAGGA ATAA
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| Protein sequence | MSTRATNNGA DAKDDAPEQA EKTETTAKRP ARRWDPRNWR VRSRLVALVV VPTAAALILG
VVRFSESALN TFRNERTEAM VTLAEDIVQL GNELGKERML VAAYIADNPN PTRRSNDRAV
ALQEQQKIVD QELNDVRAGA NELGTPSDPL VKERLDIMLD SLEKLNGVRE EVTSTRVTML
PAVTKYRQII STLTDFVETL ANATNTSSEL RESVRALSAL GRARDDQSYE AALMVHSLIR
DSMSGGVQDS IESTQARYNN EIRNFRNSAT PAQEALLDEN YGGLDVSRLG TMRLRALLRA
DEGQPLTGIT DGDDADSYQQ TALSALDTLA KVESSLARMV RAEATAHKEQ GRRLLLFDSI
TVLFVVVFVF LTTSWVARSM VIPLRVLRDG AMRIAAKDLP EAIVRMRETN VRPEEVKITP
LEVDSSDEFG EVARSFDEVH RSALRLAADE AALRANVNAM FVNLSRRSQS LVERQLRLIE
HLEQSEQDEE RLAELFQLDH LATRMRRNNE NLLVLSGQDN TRKWAQPVPL VDVLRAAVSE
VEQYARVNVR APSHVSVLGR PVNDVIHLIA ELVENATVFS AHDTQVSVTA QAVDNGDIII
EITDSGIGMS AEELESANQK LAEPPVIDVA VSRRMGLFVV SRLANRHGIE VRLRPAHNGG
ITAAVRLPND LLITPVEPTP PALTSGRGTT VPDTYAEATA AFASSPAPAD PADSVWEPRT
SNDRPVWEPR TTPSGLPKRP DPATRAAQQG QQTPPEHPPS GEDLWDAGWK RSVSRTTSPQ
PVADRPETPR TETPRPETPR PETPRTETPR TESPADTTST SAIPTVSDSR PSAADTVGSS
RTGGQSVYGY SLDRPGQRSA HPLGDTRSST SERQGWQQNP LSSSYSSGSG RTEQPEVREG
YGSTAYLSKR YGPGSGNQNT IIPPSPEHES NEPLPIFDSI ESNWFRRRTV RPAVTTTETG
PISAVSTPDG LGTEPAAPAQ QQSQQPRPED EWRSAADAGW KTAAERASAP IAGGITASGL
PKRIPRANLV PGAAPAPENF KQITSRSAER VRSRFSSFQQ GIRQGRDALN KRSSQEE
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