Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0937 |
Symbol | |
ID | 3579393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1102195 |
End bp | 1103649 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637684632 |
Product | beta-galactosidase |
Protein accession | YP_288998 |
Protein GI | 72161341 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
TIGRFAM ID | [TIGR03356] beta-galactosidase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0483408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACCTCGC AATCGACGAC TCCTCTGGGC AATCTCGAGG AGACTCCCAA ACCGGATATC CGCTTCCCGT CCGATTTCGT GTGGGGAGTG GCGACCGCTT CGTTCCAGAT CGAAGGCTCC ACCACGGCCG ACGGCCGCGG CCCCAGCATC TGGGACACCT TCTGCGCCAC TCCGGGCAAG GTCGAGAACG GCGACACGGG CGACCCTGCC TGCGACCACT ACAACCGGTA CCGCGATGAC GTGGCCTTGA TGCGGGAGCT GGGCGTGGGC GCCTACCGCT TCTCCATCGC CTGGCCGCGG ATCCAGCCCG AGGGCAAGGG CACGCCCGTG GAGGCCGGGC TGGACTTCTA CGACCGGCTT GTGGACTGCC TGCTGGAGGC CGGCATCGAG CCGTGGCCGA CCCTCTACCA CTGGGACCTG CCGCAGGCGC TGGAGGACGC GGGCGGCTGG CCCAACCGGG ACACGGCCAA GCGGTTCGCC GACTACGCGG AGATCGTCTA CCGCCGGCTC GGCGACCGGA TCACCAACTG GAACACGCTC AACGAGCCGT GGTGCTCCGC GTTCCTGGGC TACGCCTCCG GCGTGCACGC CCCGGGCCGC CAGGAGCCGG CTGCTGCGCT GGCCGCCGCC CACCACCTGA TGCTGGGCCA CGGGCTGGCC GCTGCCGTGA TGCGGGACTT GGCGGGCCAG GCCGGACGTT CCGTGCGGAT CGGTGTCGCG CACAACCAGA CCACGGTCCG TCCCTACACT GACAGTGAGG CCGACCGGGA CGCTGCGCGC CGGATTGACG CCCTGCGGAA CCGCATCTTC ACCGAGCCGC TGGTGAAGGG CCGCTACCCG GAGGACCTGA TCGAGGACGT CGCCGCGGTC ACCGACTACA GCTTCGTCCA GGACGGCGAC CTGAAGACCA TCTCCGCCAA CCTGGACATG ATGGGCGTCA ACTTCTACAA CCCGAGCTGG GTGTCAGGCA ACCGGGAGAA CGGGGGCTCC GACCGGCTGC CCGACGAGGG CTACTCGCCG TCGGTCGGCA GCGAGCATGT CGTGGAGGTG GACCCCGGCC TGCCGGTGAC CGCCATGGGC TGGCCGATCG ACCCGACCGG GCTGTACGAC ACGCTGACCC GGCTGGCCAA CGACTACCCG GGCCTGCCGC TGTACATCAC CGAGAACGGC GCCGCCTTCG AGGACAAGGT GGTCGACGGC GCGGTGCACG ACACCGAGCG GATCGCCTAC CTGGACTCGC ACCTGCGGGC CGCGCACGCT GCCATTGAGG CGGGCGTGCC GCTCAAGGGC TACTTCGCCT GGTCGTTCAT GGACAACTTC GAGTGGGCCC TCGGGTACGG GAAGCGGTTC GGCATCGTGC ACGTGGACTA CGAGAGCCAG ACGCGCACGG TGAAGGACAG CGGCTGGTGG TACTCCCGGG TGATGCGCAA CGGGGGAATC TTCGGACAGG AATAG
|
Protein sequence | MTSQSTTPLG NLEETPKPDI RFPSDFVWGV ATASFQIEGS TTADGRGPSI WDTFCATPGK VENGDTGDPA CDHYNRYRDD VALMRELGVG AYRFSIAWPR IQPEGKGTPV EAGLDFYDRL VDCLLEAGIE PWPTLYHWDL PQALEDAGGW PNRDTAKRFA DYAEIVYRRL GDRITNWNTL NEPWCSAFLG YASGVHAPGR QEPAAALAAA HHLMLGHGLA AAVMRDLAGQ AGRSVRIGVA HNQTTVRPYT DSEADRDAAR RIDALRNRIF TEPLVKGRYP EDLIEDVAAV TDYSFVQDGD LKTISANLDM MGVNFYNPSW VSGNRENGGS DRLPDEGYSP SVGSEHVVEV DPGLPVTAMG WPIDPTGLYD TLTRLANDYP GLPLYITENG AAFEDKVVDG AVHDTERIAY LDSHLRAAHA AIEAGVPLKG YFAWSFMDNF EWALGYGKRF GIVHVDYESQ TRTVKDSGWW YSRVMRNGGI FGQE
|
| |