| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0934 |
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| Symbol | |
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| ID | 3579390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1098773 |
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| End bp | 1100071 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637684629 |
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| Product | putative solute binding lipoprotein |
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| Protein accession | YP_288995 |
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| Protein GI | 72161338 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.46058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAACTT TTCACCGTCG GTACTGGAAG ACGACCGCTG CGATGCTGGG CGTAGTGGCG
CTTCTCGGCA CCTCTGCGTG TAGCGGCGAC GATGAAGCCG ACAGCGACGG CAAGATCACT
CTGACCGTCG ACACGTTCGG GGTCTTCGGG TACGACGAGC TCTTCGAGCA GTACATGGAG
GAGAACCCGA ACATCATCAT CAAGGAGAAC AACGTCACCG ACCTGCACGC CGACTACGTG
CCCCAGCTCC AGCAGAACAT TGCGGCAGGC AGCGGCGCCG GTGACATCGT CGCCATCGAG
GAAGGTATCG TCCAGCAGTT CTTCCTCAGC CAGGGCGACA ACTTCGTCGA CCTCGCCGAG
TACGGCGCGG AGGAGCTGAA GGACAACTTC CTGCCCTGGA AGTGGGAGAT GGGCAAGGGC
CCGAACGGGG AGATCCTCGG CCTCGGCACC GACATCGGTG GCATGAGCAT GTGCTACAAC
AAGACGCTCT TCGAGGACGC GGGCCTGCCC ACCGACCGGG AAGAGGTCAG CGCGAGCTGG
GAGACCTGGG ACGACTTCAT CGAGGTCGGT AAGAAGTTCC AGGAAGCCCA GACCGGCGCC
TCCTTCATCT CCACGACCGT CCCCTACTTC AGCGCCGTCA ACGCCCAGGG CGGCACCCAC
ACCTTCTTCG ACGAGGACAA CAACCTCGTC GCGGAGACCA ACCCGGTCAT CCTGGAGAGC
TGGGACCTCA TGGTGCAGAT GGTCGAGGAA GGCCTCTCGG CCAACCTGCC GATGTGGTCT
GACGAGTGGA ACGCCGGTAT CCAGAACAAC GTCTTCGCCA CCCTGCCCTG CCCGGCCTGG
ATGCTCGGCC ACATCGAGAA CACCGCGGGC GAGAGCGGCC GCGACCAGTG GGATGTCGCG
AGCGTCCCTG GCAACGGTGG TAACTGGGGC GGCTCCTGGC TGGCAGTGAC CACCCAGAGC
AAGCACCCTG AGGAGGCCGC GAAGCTGGCC ATGTTCCTCA CCAGCCCCGA GGGCCAGATC
TCCGCGTGGA ACGCCGCCAA CACCCTGCCG TCCTCGCCGA AGGCCCTGGA CGACCCGGCG
GTCACCGAGT TCACCCGCGA CTACTTCAAC GAGGCCCCGG TCGGCAAGAT CTACGCCGAG
ACCGCCAAGG AGCTGAAGCC CGTCTACTAC GGCATCCACC ACGCCCAGGT GAGCGAGGAG
TTCCGTAAGG CCCTCGAAGC CATGGAGCAG GGCCAGCTCT CTCCGGAAGA GGCCTGGCAG
CAGGCGATCG ACGGCGCCAA GCGGGCCTCG GGCCAGTAA
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| Protein sequence | MRTFHRRYWK TTAAMLGVVA LLGTSACSGD DEADSDGKIT LTVDTFGVFG YDELFEQYME
ENPNIIIKEN NVTDLHADYV PQLQQNIAAG SGAGDIVAIE EGIVQQFFLS QGDNFVDLAE
YGAEELKDNF LPWKWEMGKG PNGEILGLGT DIGGMSMCYN KTLFEDAGLP TDREEVSASW
ETWDDFIEVG KKFQEAQTGA SFISTTVPYF SAVNAQGGTH TFFDEDNNLV AETNPVILES
WDLMVQMVEE GLSANLPMWS DEWNAGIQNN VFATLPCPAW MLGHIENTAG ESGRDQWDVA
SVPGNGGNWG GSWLAVTTQS KHPEEAAKLA MFLTSPEGQI SAWNAANTLP SSPKALDDPA
VTEFTRDYFN EAPVGKIYAE TAKELKPVYY GIHHAQVSEE FRKALEAMEQ GQLSPEEAWQ
QAIDGAKRAS GQ
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