Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0915 |
Symbol | |
ID | 3579215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1077129 |
End bp | 1079651 |
Gene Length | 2523 bp |
Protein Length | 840 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637684610 |
Product | beta-mannosidase |
Protein accession | YP_288976 |
Protein GI | 72161319 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.765709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAACACC GCTTCACCTG TGGAGACGCC ATGGCAGTGC GCATCGAACT GCGCGAGAAC TGGGTCCTCC GTGCGGACGA TCCCGCCGAG GTTCCAGTGG AGATCGGCCC TGCGGGGATA CCGGCGACCG TGCCGGGATG CGTGCACACC GACCTCATGG CGGCGAACCT CATTCCCGAC CCTTACCAAG GTCGCAACGA GACCGAGCTC GGCTGGATCG GCCGCACCCA GTGGAGCTAC ACGACCACCT TCGACGCCAC CGCACTGGCT GAGGCAGAAC GGATCGACCT GGAATGCGCC GGACTGGACA CCGTGGCCAC GGTGTTCCTC AACGGTACGG AAGTCGGCCA GAGCCGCAAT ATGCACCGCT CCTACCGTTT CGACCTGCGC CGGGCGCTCC GAGACGGCAC TAACGAACTG AGGGTCGAGT TCGCCTCCCC CTACAGCTAC GCCACGGCGC TCCGCGACAA GCTCGGGGAC CGGCCCAACG CCTACCCCGA GCCGTTCCAG TTCATCCGCA AGATGGCCTG CAACTTCGGC TGGGACTGGG GCCCCACCCT CGTCACCTCG GGGATCTGGC GGCCGATCCA CGTGCACGCG TGGCACACGG CCCGCCTAGC CCAGGTCGTC CCCCTGATCA CCGTGGCCCG CACCCACGAC GGCAGCCTGG AGGGCCGCGT CCTGGTGCGG GTGGAGGTGG AGCGGAGCGA GCACGGGGAG GACACCGAGC TGGTCGTGCG CGTCCGGATC GCCGACCGGG AGCAGTCAAT CGCCGTCCCC GCCGGGGTGT GCCGTACCGA ACTGGAGGTC ACCGTCCCCG ACCCCGACCT CTGGTGGCCC CGCGGCTACG GTGACCAGCC GCTCTACGAC CTGCGCGTCG ATCTGGCCGC TCACGGGGAG GAACTGGACA CCTGGCAGCG CCGGATCGGG TTCCGCACGG TCGAGCTCGA CACCGGTGTC GACGAGGACG GCCGCCGGTT CACCATCGTC GTCAACGGGG TGCCCGTCCT CGTCAAGGGC GCCAACTGGA TTCCCGACGA CTGTTTTGTG AGCCGGGTGG GGCGCGACCG CTACGCCGCG CGGATCGACC AGGCGGTCGC GGCCAACATG AACCTGCTGC GGGTGTGGGG CGGCGGCCGC TACGAGAGCG AGGACTTCTA CGAGCTGTGC GACGAGCGCG GCATCCTCGT CTGGCAGGAC TTCCTGTTCG CCTGCGCCGC CTACCCCGAG GAGCCGCCGA TCACTGAAGA GGTCGAGGCC GAGGCCCGCG AAGTGGTGGC CCGGCTCGCC CCCTACCCCA GCCTGGTGCT GTGGAACGGC AACAACGAGA ACATCTGGGG CTACTGGGAC TGGGGCTGGA AGGAGGAGCT GGCGGGCCGG AGCTGGGGCG AAGGCTACTA CCTGGAGCTG CTGCCGCGGA TCGTCGCCGA GGTCGACCCT ACGCGCCCCT ACTGGCCGGG CAGCCCGTAC TCCGGGGTGC CGGACATCCA CCCCAACGAC CCGCGGTACG CCTCCATCCA CATCTGGGAC GTGTGGAACG AGGTGGACTA CACCGCCTAC CGCAACTACC GGCCCCGGTT CGTGGCCGAG TTCGGGTTCC AGGCCCCGCC CACCTACGCC ACGCTGCGCT CCGCCCTGCC CGGAGAGGAG CTGCGACCGG ATTCGCCGGG CATGCTGCAC CACCAGAAGG CGGTCGACGG CAACGGCAAG CTCGCCCGCG GCCTGGCCCC GCACTTCGGC AACCCTGCCG ACTTCGACGA CTGGCACTAT CTGACCCAGG TCAACCAGGC GCGCGCGATT ACTCTGGGCA TCGAGCACTT CCGCGCCCAG TGGCCCCGGT GCACGGGGAG CGTGGTCTGG CAGCTCAACG ACTGCTGGCC GGTGACGTCG TGGTCGGCTG TGGACGGCGA AGGCCGGCGC AAACCGCTGT GGTACGCCCT GCGGGCGGTC TACGCCGAGC GGCTGGCCAC GGTGCAGCCT GACGGCGACG GCCTGGTCCT CGTCGTGGCA AACGACAGCA ACCGGGAGTG GACCGGGACC GCGCACCTGG CCCGGCGGGC CTTGGACGGC ACGGTGCTGG CCGCGGCCGA TGCCCCGTTC ACTGTGCCTG CCCGCGGCGC CGTCCGGGTG CCGCTGCCCG CCGAGGTGGC GCGCCCCGGG GATGCGACCC GGGAATTGAT TACCGCGGAC ACGGGGGCAC GCCGAGCGTA CTGGTTCTTC GCTGAGGACC GCGAGATCGC CTATCCGGCG CCGGAGTACG ACACCCGTGT CGTGCCGCGT GGCGCGGACC TGTGCGTGAC CGTGACGGCG CGGAGCCTGC TGCGCGACCT CTCCCTGTTC GCGGACCGCC TCGATCCGGG GGCCGAGGCG GATGACATGC TGGTCACCCT CCTGCCGGGA GAGTCGCACA CGTTCACGGT GCGCGGCGGT GCCCACCTCG ACCCTGCCCA GGTGGTCCAG CCGCCCGTGC TGCGCACCGT CAACGACGCG CTGCGCGCCG CGCAGGACAG CATCCCGGTC TGA
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Protein sequence | MQHRFTCGDA MAVRIELREN WVLRADDPAE VPVEIGPAGI PATVPGCVHT DLMAANLIPD PYQGRNETEL GWIGRTQWSY TTTFDATALA EAERIDLECA GLDTVATVFL NGTEVGQSRN MHRSYRFDLR RALRDGTNEL RVEFASPYSY ATALRDKLGD RPNAYPEPFQ FIRKMACNFG WDWGPTLVTS GIWRPIHVHA WHTARLAQVV PLITVARTHD GSLEGRVLVR VEVERSEHGE DTELVVRVRI ADREQSIAVP AGVCRTELEV TVPDPDLWWP RGYGDQPLYD LRVDLAAHGE ELDTWQRRIG FRTVELDTGV DEDGRRFTIV VNGVPVLVKG ANWIPDDCFV SRVGRDRYAA RIDQAVAANM NLLRVWGGGR YESEDFYELC DERGILVWQD FLFACAAYPE EPPITEEVEA EAREVVARLA PYPSLVLWNG NNENIWGYWD WGWKEELAGR SWGEGYYLEL LPRIVAEVDP TRPYWPGSPY SGVPDIHPND PRYASIHIWD VWNEVDYTAY RNYRPRFVAE FGFQAPPTYA TLRSALPGEE LRPDSPGMLH HQKAVDGNGK LARGLAPHFG NPADFDDWHY LTQVNQARAI TLGIEHFRAQ WPRCTGSVVW QLNDCWPVTS WSAVDGEGRR KPLWYALRAV YAERLATVQP DGDGLVLVVA NDSNREWTGT AHLARRALDG TVLAAADAPF TVPARGAVRV PLPAEVARPG DATRELITAD TGARRAYWFF AEDREIAYPA PEYDTRVVPR GADLCVTVTA RSLLRDLSLF ADRLDPGAEA DDMLVTLLPG ESHTFTVRGG AHLDPAQVVQ PPVLRTVNDA LRAAQDSIPV
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