| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0911 |
|---|
| Symbol | |
|---|
| ID | 3579211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 1073070 |
|---|
| End bp | 1074065 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637684606 |
|---|
| Product | ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| Protein accession | YP_288972 |
|---|
| Protein GI | 72161315 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.970668 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGTAAAT ACTTCGGCCG CAAGATTTTT GTCTACGCGC TGACCTTCTT TGCAGCAGTC
ACCATCAACT GGATGATCCC GCGGCTGATG CCCGGTGACC CCATCAAGAG CCGGCTCGCC
CGTGCTTCGC TCAACGACGC TGGCGCAGCG GAAGCGTTGT ACGGGTACTT CAACAAGATG
TTCGGCCTGG ACCTGCCGCT CTGGCAGCAG TACCTCAACT TCTGGGTCTC GCTGTTCCAG
GGCGACCTGG GGATTAGCAT CTGGAACTTC CCCACGCCTG TTATTGACCT GATTTTGGGA
GCGGTCCCAT ACAGTCTGGG ACTCCTGCTG CCCTCGATTA TCCTGAGCTG GCTCGTCGGC
AACTGGTTCG GCGCCTACGC CGCGCGGAGC AAGTGGCTGG ACAACACGAT CCTGCCCATC
GGCTACATCC TCACCGCTAC TCCCTACATG TGGCTGGCGC TCCTGCTGGC CTGGAGCCTC
GGCATCGTCG CGGGCCTGTT CCCCGCCGCA GGATCGTACG GCCTCTCCCT CCAGCCTGCG
TTCACTTGGA CGTTCATCTC CAGCCTGCTG GAGCACTGGT TCCTGCCGTT CCTGTCGCTG
TTCCTGGTCG CCCTGGGCGG CTGGGCCATC GGCATGCGGA ACATGATCAT CTACGAGCTG
GAGTCCGAGT ACTCCAACTA CCTGCAGGCG CTGGGCGCGC CGCGTCGCTT GATCCGCAAG
TACGCTTTCC GTAACGCCAT GCTGCCCCAG CTCACCGGCC TGGCCGTGCA GTTGGGCACG
GTGGTCGCGG GCGCGCTGCT CACCGAAATC GTCTTCTCCT ACCAGGGCCT GGGCTACCTG
ATCCTGCAGG CGATCCAGAA CCAGGACTTC TTCCTGCTGC AGGGAACCTT CCTGTTCATC
GTCATCGGCG TACTGATCGC TAACTTCATC ATCGACATCG TCTACGCCCT GGTCGACCCG
CGTGTCCGCG TCCAGATGCA GGGAGGAGCC AAATGA
|
|---|
| Protein sequence | MRKYFGRKIF VYALTFFAAV TINWMIPRLM PGDPIKSRLA RASLNDAGAA EALYGYFNKM
FGLDLPLWQQ YLNFWVSLFQ GDLGISIWNF PTPVIDLILG AVPYSLGLLL PSIILSWLVG
NWFGAYAARS KWLDNTILPI GYILTATPYM WLALLLAWSL GIVAGLFPAA GSYGLSLQPA
FTWTFISSLL EHWFLPFLSL FLVALGGWAI GMRNMIIYEL ESEYSNYLQA LGAPRRLIRK
YAFRNAMLPQ LTGLAVQLGT VVAGALLTEI VFSYQGLGYL ILQAIQNQDF FLLQGTFLFI
VIGVLIANFI IDIVYALVDP RVRVQMQGGA K
|
|---|
| |