| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0910 |
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| Symbol | |
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| ID | 3579210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1071235 |
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| End bp | 1072953 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637684605 |
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| Product | ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components |
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| Protein accession | YP_288971 |
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| Protein GI | 72161314 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.293935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAACC GCTACAGGTT TCTGATCCCC CTCGCACTGG TCAGCTTGCT GGCCACATCC
TGCGGGGGTG ACACAGAGGG CGACGGTGGA GCGACAGGGG ACTACCCCCG TGCGGAGACC
CTCTACACCG GTGGTACCCA GTGGGGGCCG CCGAGCACGT GGAACCCGCT CGACACGGGT
AACTACGCCA CCGGAACGGT GGGTCTGGTC TACGAGACCC TGTTCCTCTA CGAGCCGCAG
ACTGGAGAAT ACATCCCCTG GCTTGCGGAG AGCGGCGAGT GGGTCGACGA CAAGACCTAC
GAGCTGAAGC TCCGCCAGGG CGTCAAGTGG AGCGACGGCG AAGACTTCAC CGCCGACGAC
GTGGTCTTCA CCGTCGAGAT CGGCAAGTAC GAGGGCTCCT CCTACCACTC GCTGTGGGAG
TGGCTCGAGA GCGCTGAGGC CGTCGACGAC TACACGGTCA AGTTCACCTT CTCCAAGGCC
AACTACGCGC AGTGGGCCAA CTGGCTGTAC TTCAACGCCA TTGTGCCCGA ACACATCTGG
TCGGAGCGCT CCGAGGAGGA GATCCTCACC GGCGCCAACG AGGACCCCGT CGGCACCGGC
CCGTACCTCT ACGAGACCCA CGACCAGGAC CGCCAGGTCT GGAAGAAGAA CGAGGACTGG
TGGGCCACTG AGGCGCTCGG CCACGAGGTC AAGCCCACGT ACATCGTCGA CGTGGTCAAC
ACCAGCAACG AGGCCGCGCT GAGCCAGGTG CTCCAGGGCA ACATCGACAT CAACAACAAC
TTCCTGCCCG GTATCGCGCA GCTCGTCCAG GGCGGCTACC AGGTCCAGAC CTACTTCCCT
GAAGAGCCCT ACATGCTCGC GGCCAACACC GCGTGGCTGG TGCCCAACAC CACCAAGAAG
CCGATGGACG ACCCTGAGTT CCGCAAGGCG CTCTCGGCCT CCATCGACAT GGACGAGATC
GTCAACAACG TCTACGGCGG CCTGGTCACC GAGGCCGACC CCACCGGTCT GCTCCCTGTC
TGGGACGACT ACATCGACAC CGAGGTGGTC GAGAAGCACG CCACCCCGCG TGACCCGAAG
GTCGCCAAGA AGATCCTTGA GGAAGCCGGC TACGAGGACA CCGACAACGA CGGCTTCGTC
GAGACCCCTG ACGGTGAGCC GATCGATCTG ACCCTCATCG TTCCCAGCGG CTGGACCGAC
TGGATGGAGG CCGCCCGGGT CATCAGCGAG AGCGCGAGCG AAGTCGGTAT CAAGGTCACC
ACTGACTTCC CCGAGTTCAA CGCCCTGGTG GACCAGCGCA ACAGCGGCGA GTTCGACCTG
GTGATCAACA ACGAGCGCCA GATCAGCAAC ACGCCGTGGA CCTACTACGA CTACATCTTC
CGCCTCCCGG TCCAGGACCA GCAGACTACG GTCAACTTCG GCCGCTACGA GAACGAAGAG
GCCTGGGAGC TGGTGGGTGA ACTCGACGGC ATCCCGGTTG AGGACACCGA GAAGATCCGC
GAGGTGGCGG GCAAGATCCA GAAGATCCAG CTCGAGGAGA TGCCGGTCAT CCCGCTCTGG
TACAACGGCC TGTGGGCGCA GTACAACAAC TCGGTGTGGA CCAACTGGCC CTCCAGCGAG
TCCGACAACA ACTACCTGCC CTCGACCTGG CGCGGCTACT TCCAGCTCGG CAGCATCCTG
ATGCTGACCG AACTGGAGCC CGCCTCGGAG GAAGAGTAG
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| Protein sequence | MRNRYRFLIP LALVSLLATS CGGDTEGDGG ATGDYPRAET LYTGGTQWGP PSTWNPLDTG
NYATGTVGLV YETLFLYEPQ TGEYIPWLAE SGEWVDDKTY ELKLRQGVKW SDGEDFTADD
VVFTVEIGKY EGSSYHSLWE WLESAEAVDD YTVKFTFSKA NYAQWANWLY FNAIVPEHIW
SERSEEEILT GANEDPVGTG PYLYETHDQD RQVWKKNEDW WATEALGHEV KPTYIVDVVN
TSNEAALSQV LQGNIDINNN FLPGIAQLVQ GGYQVQTYFP EEPYMLAANT AWLVPNTTKK
PMDDPEFRKA LSASIDMDEI VNNVYGGLVT EADPTGLLPV WDDYIDTEVV EKHATPRDPK
VAKKILEEAG YEDTDNDGFV ETPDGEPIDL TLIVPSGWTD WMEAARVISE SASEVGIKVT
TDFPEFNALV DQRNSGEFDL VINNERQISN TPWTYYDYIF RLPVQDQQTT VNFGRYENEE
AWELVGELDG IPVEDTEKIR EVAGKIQKIQ LEEMPVIPLW YNGLWAQYNN SVWTNWPSSE
SDNNYLPSTW RGYFQLGSIL MLTELEPASE EE
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