| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0901 |
|---|
| Symbol | |
|---|
| ID | 3579455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 1062716 |
|---|
| End bp | 1064116 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637684596 |
|---|
| Product | cellulase |
|---|
| Protein accession | YP_288962 |
|---|
| Protein GI | 72161305 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAAT CCCCCGCCGC CCGGAAGGGC GGCCCTCCGG TCGCTGTCGC GGTGACCGCG
GCCCTCGCCC TGCTGATCGC GCTCCTCTCC CCCGGAGTCG CGCAGGCCGC CGGTCTCACC
GCCACAGTCA CCAAAGAATC CTCGTGGGAC AACGGCTACT CCGCGTCCGT CACCGTCCGC
AACGACACCT CGAGCACCGT CTCCCAGTGG GAGGTCGTCC TCACCCTGCC CGGCGGCACT
ACAGTGGCCC AGGTGTGGAA CGCCCAGCAC ACCAGCAGCG GCAACTCCCA CACCTTCACC
GGGGTTTCCT GGAACAGCAC CATCCCGCCC GGAGGCACCG CCTCCTTCGG CTTCATCGCT
TCCGGCAGCG GCGAACCCAC CCACTGCACC ATCAACGGCG CCCCCTGCGA CGAAGGCTCC
GAGCCGGGCG GCCCCGGCGG TCCCGGAACC CCCTCCCCCG ACCCCGGCAC GCAGCCCGGC
ACCGGCACCC CGGTCGAGCG GTACGGCAAA GTCCAGGTCT GCGGCACCCA GCTCTGCGAC
GAGCACGGCA ACCCGGTCCA ACTGCGCGGC ATGAGCACCC ACGGCATCCA GTGGTTCGAC
CACTGCCTGA CCGACAGCTC GCTGGACGCC CTGGCCTACG ACTGGAAGGC CGACATCATC
CGCCTGTCCA TGTACATCCA GGAAGACGGC TACGAGACCA ACCCGCGCGG CTTCACCGAC
CGGATGCACC AGCTCATCGA CATGGCCACG GCGCGCGGCC TGTACGTGAT CGTGGACTGG
CACATCCTCA CCCCGGGCGA TCCCCACTAC AACCTGGACC GGGCCAAGAC CTTCTTCGCG
GAAATCGCCC AGCGCCACGC CAGCAAGACC AACGTGCTCT ACGAGATCGC CAACGAACCC
AACGGAGTGA GCTGGGCCTC CATCAAGAGC TACGCCGAAG AGGTCATCCC GGTGATCCGC
CAGCGCGACC CCGACTCGGT GATCATCGTG GGCACCCGCG GCTGGTCGTC GCTCGGCGTC
TCCGAAGGCT CCGGCCCCGC CGAGATCGCG GCCAACCCGG TCAACGCCTC CAACATCATG
TACGCCTTCC ACTTCTACGC GGCCTCGCAC CGCGACAACT ACCTCAACGC GCTGCGTGAG
GCCTCCGAGC TGTTCCCGGT CTTCGTCACC GAGTTCGGCA CCGAGACCTA CACCGGTGAC
GGCGCCAACG ACTTCCAGAT GGCCGACCGC TACATCGACC TGATGGCGGA ACGGAAGATC
GGGTGGACCA AGTGGAACTA CTCGGACGAC TTCCGTTCCG GCGCGGTCTT CCAGCCGGGC
ACCTGCGCGT CCGGCGGCCC GTGGAGCGGT TCGTCGCTGA AGGCGTCCGG ACAGTGGGTG
CGGAGCAAGC TCCAGTCCTG A
|
|---|
| Protein sequence | MAKSPAARKG GPPVAVAVTA ALALLIALLS PGVAQAAGLT ATVTKESSWD NGYSASVTVR
NDTSSTVSQW EVVLTLPGGT TVAQVWNAQH TSSGNSHTFT GVSWNSTIPP GGTASFGFIA
SGSGEPTHCT INGAPCDEGS EPGGPGGPGT PSPDPGTQPG TGTPVERYGK VQVCGTQLCD
EHGNPVQLRG MSTHGIQWFD HCLTDSSLDA LAYDWKADII RLSMYIQEDG YETNPRGFTD
RMHQLIDMAT ARGLYVIVDW HILTPGDPHY NLDRAKTFFA EIAQRHASKT NVLYEIANEP
NGVSWASIKS YAEEVIPVIR QRDPDSVIIV GTRGWSSLGV SEGSGPAEIA ANPVNASNIM
YAFHFYAASH RDNYLNALRE ASELFPVFVT EFGTETYTGD GANDFQMADR YIDLMAERKI
GWTKWNYSDD FRSGAVFQPG TCASGGPWSG SSLKASGQWV RSKLQS
|
|---|
| |