Gene Tfu_0899 details

Gene Information

• Locus tag: Tfu_0899
• ID: 3579453
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: -
• Start bp: 1058836
• End bp: 1060869
• Gene Length: 2034 bp
• Protein Length: 677 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 637684594
• Product: V8-like Glu-specific endopeptidase
• Protein accession: YP_288960
• Protein GI: 72161303
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG3591] V8-like Glu-specific endopeptidase

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACGTTC CTTACCGGAT CACCGTGGAA CGGCGGTGGC AGGAACAGCG CGCCGCACAG 
CGGTTCACGG ACACTGCCCG GAACCGGGCC CGGCTCCAGC AGCTCCAACA GCGCACCGGC 
ATCCTCATCC ACGACACCTT CGACCAGATC AAAGCGCGGG CAGAACGCCT CGCCGCACTC 
CACCGCGCCC CCGCACCCCC CGCCACCGCC GCCGACCCCG CGCAACGGCA CCGGATCTAC 
CAGCGCATCA TCGGGGACGC CAACCAGTTG CAGTCCGTCG CCTTTCTCTA CCGCGGGGCG 
CGCGCCGCGG CCTCAATCGC CCGGCTCATC CTGCTCCACC ACGGCAGGGA ACTCCCCTAC 
GGCACCGGAT TCCTCGTCGC CCCCGAACTC CTCCTCACCA ACCACCACGT ACTCACCGCC 
CCCGAGACCG CAGAACAGGT CGTCGCCGAA TTCGCCGCCG AAGTCGACGC AGACCTGCAG 
CCCCGCGTCC CCGTGCGCTA CCGCCTCGAC CCGGACACGC TCTTCCTCGC CGACCGGGAA 
CTCGACTTCG CGCTCGTCCG CGTCCACCCC GGCCCCAACG GCAGCCCACC CGGCGACGTC 
TTCGGCTGGA ACCCGCTGTT GCGCACCCAA GGAAAAGTCG TGGCCGGAGA ACCGGTCAAC 
CTCATCGGCC ACCCCCGCGG ACGCCTCAAA GAAATCGCGG TCCGCGACAG CCGACTCCTC 
CAGCAGACCG ACGACTTCCT CCAGTACTCC GCGGACACCG AACCCGGCAG CTCCGGGTCG 
CCCGTCTTCA ACGACCAGTG GGAAGTCGTG GCGCTCCACC ACTCCGCTGT GCCGCGGCGC 
GACGCCCGCG GACAGCGGCT GCGCATCGAC GGCACCCCGC TGCGGCCCGG CGACCCCGAC 
TCGGTCGCCG CCTGGCTCGG CAACGAAGGC ACCCGGGTCA GCTCCATCCT GGACTTCCTC 
GCCACGCTCG ACCTGCCCCC GGCCCAGCGC GAACTGCTCG CCACCCTCGG CCCCGCATCC 
GGTCTCGCCG GGGAGACCGC AGCCAGCGCG GGACCGTACT GGGAACGCCA CCGCTCCTCC 
CGGCCCACCG GAACCGGGCT GCGCGGCAGC AGCGCCCCCG ACGACATCCA CCTCGTCTTC 
CTCCACGGCC GCGGTCTGGC CGGAGAAGAC CCCGCACGGC TACGCGCCAC GTGGACAGCC 
GCACTCAACT CAGGGCTGCT CGCCGCCCGA CTGCCCACCA TCTCCCCCGA AACAGTGTGG 
TTCCCCTACT ACGGGGACCT GCTCGCCGAA CTCACCGTGG ACGCGGCAGA CACCGAAGCC 
ACCACCACCG CGGAAACACT CGCCCCCGTC CTCGACGAGC CCCACGCGAT CTACACCTCG 
CTCCTGGAAC AGGCCGCGCT CCGCTCCGGG ATGCCCGCCG AACTCGTCCA CGGGAACACC 
GACCATGAAG GCGGCTCCGC GCTCGGCCTG CTCTCCCCGC TCACCAGCCG CCTGCAGCGG 
CAGTTGAGCT GGGTGGCAGC CCGCAGCGGC CTCGACGAAA CCCTCATCGC CCTCTTCCTG 
CGGGACGTCG CCGCCTACCT GGGCGACCAG GACGTGAAAA CCGCGATCCT CGACCAGGTC 
GCCGCCGCCC TCCCGCAGAG CGGGCAGGCC GTCATCGTCA GCCACAGCCT CGGCACCGTC 
GTAGCGGTCG ACCTGCTCAG CCGGGCCCGC CCCGACATCA CCGTGCCGCT GCTCGTCACC 
ATGGGCAGCC CGCTCGGACT CGACGCTGTC TACACCCGGG TCCTCCTCCA GCCGCCGCGC 
CGCCCCGACC GGGTCACGGC ATGGCTCAAC GCGTGGACCC CGGCGGACGC CACCACCATC 
GGCTGCCCGC TGACCCCCGT GTGGGGGCCG GGGCTCGTGG AAGTCGTCAC CGCCAACTCG 
CGGCGGCGCC CCCACGACGT CGAGGAATAC CTGCGCCACC CCCAGGTGGC CGCCCCCGTC 
GCCGAAGCCC TCCACCCGGA CGGAGTACCC GCCCCGCCGG GACTGGCCGC ATAA 

 

Protein sequence

MDVPYRITVE RRWQEQRAAQ RFTDTARNRA RLQQLQQRTG ILIHDTFDQI KARAERLAAL 
HRAPAPPATA ADPAQRHRIY QRIIGDANQL QSVAFLYRGA RAAASIARLI LLHHGRELPY 
GTGFLVAPEL LLTNHHVLTA PETAEQVVAE FAAEVDADLQ PRVPVRYRLD PDTLFLADRE 
LDFALVRVHP GPNGSPPGDV FGWNPLLRTQ GKVVAGEPVN LIGHPRGRLK EIAVRDSRLL 
QQTDDFLQYS ADTEPGSSGS PVFNDQWEVV ALHHSAVPRR DARGQRLRID GTPLRPGDPD 
SVAAWLGNEG TRVSSILDFL ATLDLPPAQR ELLATLGPAS GLAGETAASA GPYWERHRSS 
RPTGTGLRGS SAPDDIHLVF LHGRGLAGED PARLRATWTA ALNSGLLAAR LPTISPETVW 
FPYYGDLLAE LTVDAADTEA TTTAETLAPV LDEPHAIYTS LLEQAALRSG MPAELVHGNT 
DHEGGSALGL LSPLTSRLQR QLSWVAARSG LDETLIALFL RDVAAYLGDQ DVKTAILDQV 
AAALPQSGQA VIVSHSLGTV VAVDLLSRAR PDITVPLLVT MGSPLGLDAV YTRVLLQPPR 
RPDRVTAWLN AWTPADATTI GCPLTPVWGP GLVEVVTANS RRRPHDVEEY LRHPQVAAPV 
AEALHPDGVP APPGLAA