Gene Tfu_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0890 
Symbol 
ID3579444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp1051101 
End bp1051835 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content72% 
IMG OID637684585 
Producthypothetical protein 
Protein accessionYP_288951 
Protein GI72161294 
COG category[R] General function prediction only 
COG ID[COG2129] Predicted phosphoesterases, related to the Icc protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACTG TCGCTGCCGT GGGCGACGTG CACATGGACC AGGAGATGCG GGGACGCTAC 
CGGCCGCGGC TCGGTGGGCT GGCGGGCGAC GCCGACGTGC TGCTCCTGGC CGGCGACTTG
ACCAAGCACG GCACGGTCGA GGAGGCGCAG GTGGTCGCCG ACGAGTTCCG CGACCTGCCC
GTGCCCGTGG TCGCGGTGCT CGGCAACCAC GACTACCACT CCGATGCCCA CGAGGAGATC
GCCGCCTTGC TGCGGGCCGT GGGGATCACC GTGGTCGAAG GGGAGGGCAC GGTCGTGGCC
TGCCCGGGGG GACGACTCGG CGTGGCCGGG GTGAAAGGCT TCGCTTTAGG GTTTCCAGGC
CAGTGCGCGT CCGAGTTCGG CGAACCGGAG ATGAAGTGTT TCGCCAGGAG CTCGCGGGAA
GCCGCCGAAC GGCTCGGGGC AGCGCTGGCG TCGCTGGACG CGGACACTGT GGTCGCCCTC
ACCCACTATG CGCCGGTCCG GGACACGCTG GCGGGGGAGC CCGTGGAGAT CTTCCCGTTC
CTCGGCAGCT ACCTGCTGGC GGAGGCGATT GATGCGGCGG GGGCGGCTCT CGCGGTGCAC
GGGCACGCCC ACCGGGGCAC CGAGGTGGGG ATGACCGCGG GCGGGGTGCC GGTGCGCAAC
GTGGCTTTGC CGGTCCTCGG CCGCCCCTAC GGGGTGTACC GACTCGACGA GCGCACGACA
CAGCCCACCC GCTGA
 
Protein sequence
MITVAAVGDV HMDQEMRGRY RPRLGGLAGD ADVLLLAGDL TKHGTVEEAQ VVADEFRDLP 
VPVVAVLGNH DYHSDAHEEI AALLRAVGIT VVEGEGTVVA CPGGRLGVAG VKGFALGFPG
QCASEFGEPE MKCFARSSRE AAERLGAALA SLDADTVVAL THYAPVRDTL AGEPVEIFPF
LGSYLLAEAI DAAGAALAVH GHAHRGTEVG MTAGGVPVRN VALPVLGRPY GVYRLDERTT
QPTR