Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0890 |
Symbol | |
ID | 3579444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1051101 |
End bp | 1051835 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637684585 |
Product | hypothetical protein |
Protein accession | YP_288951 |
Protein GI | 72161294 |
COG category | [R] General function prediction only |
COG ID | [COG2129] Predicted phosphoesterases, related to the Icc protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCACTG TCGCTGCCGT GGGCGACGTG CACATGGACC AGGAGATGCG GGGACGCTAC CGGCCGCGGC TCGGTGGGCT GGCGGGCGAC GCCGACGTGC TGCTCCTGGC CGGCGACTTG ACCAAGCACG GCACGGTCGA GGAGGCGCAG GTGGTCGCCG ACGAGTTCCG CGACCTGCCC GTGCCCGTGG TCGCGGTGCT CGGCAACCAC GACTACCACT CCGATGCCCA CGAGGAGATC GCCGCCTTGC TGCGGGCCGT GGGGATCACC GTGGTCGAAG GGGAGGGCAC GGTCGTGGCC TGCCCGGGGG GACGACTCGG CGTGGCCGGG GTGAAAGGCT TCGCTTTAGG GTTTCCAGGC CAGTGCGCGT CCGAGTTCGG CGAACCGGAG ATGAAGTGTT TCGCCAGGAG CTCGCGGGAA GCCGCCGAAC GGCTCGGGGC AGCGCTGGCG TCGCTGGACG CGGACACTGT GGTCGCCCTC ACCCACTATG CGCCGGTCCG GGACACGCTG GCGGGGGAGC CCGTGGAGAT CTTCCCGTTC CTCGGCAGCT ACCTGCTGGC GGAGGCGATT GATGCGGCGG GGGCGGCTCT CGCGGTGCAC GGGCACGCCC ACCGGGGCAC CGAGGTGGGG ATGACCGCGG GCGGGGTGCC GGTGCGCAAC GTGGCTTTGC CGGTCCTCGG CCGCCCCTAC GGGGTGTACC GACTCGACGA GCGCACGACA CAGCCCACCC GCTGA
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Protein sequence | MITVAAVGDV HMDQEMRGRY RPRLGGLAGD ADVLLLAGDL TKHGTVEEAQ VVADEFRDLP VPVVAVLGNH DYHSDAHEEI AALLRAVGIT VVEGEGTVVA CPGGRLGVAG VKGFALGFPG QCASEFGEPE MKCFARSSRE AAERLGAALA SLDADTVVAL THYAPVRDTL AGEPVEIFPF LGSYLLAEAI DAAGAALAVH GHAHRGTEVG MTAGGVPVRN VALPVLGRPY GVYRLDERTT QPTR
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