| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0887 |
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| Symbol | |
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| ID | 3579441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1047916 |
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| End bp | 1048839 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637684582 |
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| Product | RNA polymerase sigma-B factor |
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| Protein accession | YP_288948 |
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| Protein GI | 72161291 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAGC CGGGCGGAAG CAGGGCCACC ACACCCATCC GAGGTGCGCG GACCACACCC
ATGACCCTGC GGGGGACGTT GCCCATGTCC GTTTCGGTTT CCCACAGCGG CCACAGCTCC
AACGGCAGTC ACAGCCGTAA CAGCCGGCCG CCACGCCACG CCGACGAAGC GTATCTTCGC
GAGACCCGCG AGCTACTCGC CGAACTCGAC CGGGTCCGGG ACGACCCGAA AGCTCGCGAA
CGCATCTACC TCAAACTCAC CGAGCTGCAC GCTCCCGTGG CCCGACGCAT CGCCCGCCAG
TACCGCAACC GCGGCGAGCC CGAAGAAGAC CTGCGCCAGG TCGCGATGGT GGGGCTGTAC
AACGCCATCC GCAACTTCGA CCCCGCCTAC GGCAAAGAGT TCATCTCCTA TGCGCTGCCG
ATGATGACCG GCGAGGTGAA ACGCCACTTC AGAGACCGCA CCTGGGCGAT CCGGGTCCCG
CGCAAATACC AGGAGAAGCG CGCCGAACTC AACCGGGTCA CCGCAGAGTT CACCCAGCGG
CACGGCCGCT CGCCCACGGT CCGGGAGCTC GCGGAGCTGC TGGAGATGGA CGAGGAGCAG
ACCTTGGAGC TCATCGACGC GGCCCGCGCC TACAGCACGC TCTCCCTCGA CGTGCCGTTC
GGGCCCGACG ATGACGGCGC CACCCTGGGC GACACCCTGG GCGGACTCGA CGACGCGTTG
GAACGTGTCG TCGACCATGC GGCGCTGCGC CCCGCCTTGG CCGCCCTGTC GCCCCGCGAC
CGTCGTATCC TGCTGCTCCG CTTCGCCGGG GACAAGACCC AGGCGCAGAT CGCCGAGATC
GTCGGACTGT CGCAGATGCA CGTCTCACGG CGGCTCGCCG CGATCCTGAC GACGCTGCGG
CGCCAACTCG TCGGGGACCA CTGA
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| Protein sequence | MTEPGGSRAT TPIRGARTTP MTLRGTLPMS VSVSHSGHSS NGSHSRNSRP PRHADEAYLR
ETRELLAELD RVRDDPKARE RIYLKLTELH APVARRIARQ YRNRGEPEED LRQVAMVGLY
NAIRNFDPAY GKEFISYALP MMTGEVKRHF RDRTWAIRVP RKYQEKRAEL NRVTAEFTQR
HGRSPTVREL AELLEMDEEQ TLELIDAARA YSTLSLDVPF GPDDDGATLG DTLGGLDDAL
ERVVDHAALR PALAALSPRD RRILLLRFAG DKTQAQIAEI VGLSQMHVSR RLAAILTTLR
RQLVGDH
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