| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0878 |
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| Symbol | |
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| ID | 3579566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 1034610 |
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| End bp | 1037126 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637684572 |
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| Product | helicase, C-terminal:DEAD/DEAH box helicase, N-terminal |
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| Protein accession | YP_288939 |
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| Protein GI | 72161282 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCTCA TCGATCATCT CCCTGACGGC ACCGCTGATC CCGACACCCT GTTCGACGCC
TTCGCGTCCT GGGCTGAGGA ACGGGGGCTC ACCCTCTATC CCCACCAGGA GGAAGCCCTC
ATCGAAGTGG TGTCGGGATC CAATGTGATC CTCAACACTC CCACCGGTTC CGGGAAGAGC
CTGGTGGCCA CCGGAGCGAT CTTCGCTGCC CTGGCCCGCG ACGAATGCAG CTTCTACACC
GCCCCCATCA AAGCCCTGGT CTCGGAGAAG TTCTTCGACC TGTGCGAAAT CTTCGGCACC
GAGAACGTCG GCATGATGAC CGGCGACGCC AGCGTCAACT CTGATGCGCC GATCGTGTGC
TGCACCGCTG AAGTGCTCGC CAACATCGCC CTGCGCGACG GCGCCGACGC CGACATCGGC
ACGGTCATCA TGGACGAGTT CCACTTCTAC GCCGACCCCG ACCGGGGGTG GGCCTGGCAG
GTGCCGCTGC TGGAACTGCC GCAGGCCCAG TTCCTGCTCA TGTCGGCGAC CCTGGGGGAC
GTCAGCCGGT TCGAAGAAGA CTTGACCCGC CGCACCGGAC GCGACACGAC CGTCGTCGCC
TCCGCGGAAC GGCCGGTGCC GCTGTACTAC TCGTACCGGA CCACACCGCT GCACGAAACG
CTGGAAGAAC TGCTGGAATC CCAGCAGGCG CCCGTCTACA TCGTGCACTT CACGCAGGCC
GCGGCGGTGG AGCGCGCCCA GTCGCTGACG AGCATCAACA TGTGCTCCAA AGCGGAGAAG
GCCGCCATCG CCAAGGAGAT CGGCAACTTC CGGTTCACCA CCCGGTTCGG CCGCAACCTG
TCCCGCTACG TCCGGCACGG AATCGGCGTG CACCACGCGG GCATGCTGCC CAAGTACCGC
AGGCTGGTGG AGCGGCTCGC CCAGCGGGGC CTGCTCAAAG TCATCTGCGG CACCGACACG
CTGGGCGTGG GCGTCAACGT GCCGATCCGT ACCGTCCTGT TCACCGCACT GTCCAAGTAC
GACGGTTCCC GGGTCCGCCG GCTCACCGCC CGCGAATTCC ACCAGATCGC GGGCCGCGCG
GGCCGCGCCG GATTCGACAC GGTCGGCAAC GTGGTGGTGC AGGCCCCCGA ACACGTGGTG
GAGAACGAGC GTGCCCTCGC TAAGGCGGGC AACGACCCGA AGAAGCGGCG CAAGGTGGTC
CGCAAGAAGC CGCCGGAAGG GTTCGTCGGC TGGGACGAGG CCGTCTTCGA GAAGCTCATC
AACGCCCAGC CCGAGCCGCT CGTCTCCCAG TTCAAGGTCT CGCACGCGAT GCTGCTCAGC
GTGATCGCGC GCCCCGGCGA CTGCTTCGCG GCCATGCGCC GTCTGCTCAC CGACAACCAC
GACGACCCCA AGAAGCAACG CCGCCACATC CGCGAAGCGA TCGCGATCTA CCGGTCCCTG
TTGGACGCGG GGATCGTAGA ACGGCTGGAA GAGCCGGACG AGGAGGGCCG CACCGCGCGG
CTCACCGTCG ACCTGCAGCC CGACTTCGCG CTCAACCAGC CGCTGTCCCC GTTCGCGCTG
GCCGCGTTCG AACTGCTGGA CCGGGATTCG CCCCACTACG CGCTGGACGT GGTGAGCGTA
GTCGAGTCCA CCCTCGACGA CCCCCGGCAG ATCCTCGCCG CCCAGCTCAA CAAGGCGCGC
AGCGAGGAGC TGCAGCGGCT GAAGGCCGAA GGGCTCGACT ACGAGGAGCG GATGGCGCGG
CTGGAGGAGG TCACCTACCC CAAGCCGCTC GAGGACCTGC TGGAGCACGC CTACGAGACC
TATCGGCGCG GCCACCCGTG GGTGGGCGAC CATCCGCTGC AGGTCAAGTC GGTGGTGCGC
GACATGTACG AGCGCGCGAT GACCTTCACC GACTACATCG GCTACTACGA GCTGGCCCGT
TCGGAAGGCC TGGTCCTGCG CTACCTCGCC AGCGCGTACA AGGCGCTGAC GCAGACCGTC
CCCGAGGACA TCAAGACAGA AGAGCTGCGG GACCTGATCG AATGGCTGGG CGAAATGGTG
CGCCAGGTCG ACTCCAGCCT GCTGGACGAG TGGGAGCAGC TCACCAATCC GAGCCAGGAG
CAGGACACGG ACGCCCCCGT GGAGACCAAG CCCAAGCCGG TCACCGCCAA CCAGCGCGCC
TTCCGCGTGC TGGTGCGCAA CGAGATGTTC CGCCGGGTGG AGCTGGCAGC GCTCCGCCGC
TACGCGGAGC TGGGCGAACT GGACGGCGAA GACGGCTGGG ACGCCGAGGC GTGGGAAGAG
GCGATGGAGG CCTACTACGC CGAGCACGAG ACGTTGGGGA CCGGTCCGGA CGCGCGCGGC
CCGCACCTGC TGCTCATCAC CGAGCACGAG GACCACTGGG AGGTCCGGCA GATCTTCGAC
GACCCGGAAG GCCACCACGA CTGGGGGATC ACCGCGCACG TGGACTTGAC CGCGTCCGAC
GAGGAAGGAC GCGCAGTGGT GCACGTGGTC GCAGTGGACC GCAAGGACTC CTTCTAA
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| Protein sequence | MSLIDHLPDG TADPDTLFDA FASWAEERGL TLYPHQEEAL IEVVSGSNVI LNTPTGSGKS
LVATGAIFAA LARDECSFYT APIKALVSEK FFDLCEIFGT ENVGMMTGDA SVNSDAPIVC
CTAEVLANIA LRDGADADIG TVIMDEFHFY ADPDRGWAWQ VPLLELPQAQ FLLMSATLGD
VSRFEEDLTR RTGRDTTVVA SAERPVPLYY SYRTTPLHET LEELLESQQA PVYIVHFTQA
AAVERAQSLT SINMCSKAEK AAIAKEIGNF RFTTRFGRNL SRYVRHGIGV HHAGMLPKYR
RLVERLAQRG LLKVICGTDT LGVGVNVPIR TVLFTALSKY DGSRVRRLTA REFHQIAGRA
GRAGFDTVGN VVVQAPEHVV ENERALAKAG NDPKKRRKVV RKKPPEGFVG WDEAVFEKLI
NAQPEPLVSQ FKVSHAMLLS VIARPGDCFA AMRRLLTDNH DDPKKQRRHI REAIAIYRSL
LDAGIVERLE EPDEEGRTAR LTVDLQPDFA LNQPLSPFAL AAFELLDRDS PHYALDVVSV
VESTLDDPRQ ILAAQLNKAR SEELQRLKAE GLDYEERMAR LEEVTYPKPL EDLLEHAYET
YRRGHPWVGD HPLQVKSVVR DMYERAMTFT DYIGYYELAR SEGLVLRYLA SAYKALTQTV
PEDIKTEELR DLIEWLGEMV RQVDSSLLDE WEQLTNPSQE QDTDAPVETK PKPVTANQRA
FRVLVRNEMF RRVELAALRR YAELGELDGE DGWDAEAWEE AMEAYYAEHE TLGTGPDARG
PHLLLITEHE DHWEVRQIFD DPEGHHDWGI TAHVDLTASD EEGRAVVHVV AVDRKDSF
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