| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0853 |
|---|
| Symbol | |
|---|
| ID | 3579635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 1007744 |
|---|
| End bp | 1008592 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637684546 |
|---|
| Product | undecaprenyl pyrophosphate synthetase |
|---|
| Protein accession | YP_288914 |
|---|
| Protein GI | 72161257 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.563671 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCCCA AGACCGTCTT CTCGACCGAC ACCCACCGGG AGCCGATACC CCCGCAACCG
CACCCCAGCG GGGCTCGGCC ACCCCAGTTA CCCCGAGAAC TCATTCCCCG GCACGTGGCA
ATCGTCATGG ACGGCAACGG CCGCTGGGCC AAGCAGCGCG GCCTGCCCCG TACTGAAGGG
CACAAGGCGG GCGAGTCCTC CCTGTTCGAC GTGATCGAGG GAGCGCTGGA GCTCGGCGTG
CCCTACCTGT CCGCCTACGC GTTCTCCACG GAGAACTGGA AGCGCTCCCC GGACGAGGTG
CGCTTCCTCA TGGGGTTCAA CCGCGACGTG ATCCGACGCC GCCGTGACGA GCTGCACGCA
CGCGGGGTGC GGGTGCGCTG GGCGGGACGG CCGGGACGGC TGTGGAAGAG CGTCATCAAA
GAGCTCACCG AAGCCGAAGA GCTGACCAAG CACAACACCA AGCTCACGCT GCAGTTCTGC
GTGAACTACG GGGGCCGTGC CGAGATCGCG GACGCGGCCG CGGCCCTGGC CCGGGATGTG
GCTGCCGGCC GCCTCTCCCC CAACCGGGTC ACCGAGGCCA CGCTCGCTCG CTACCTGTAC
CACCCGGACA TCCCCGACGT GGACCTGTTC ATCCGTTCCT CCGGGGAGCA GCGCCTCTCC
AATTTCCTGC TCTGGCAGTC GTCGTACGCG GAATTCGTGT TCCTCGACAC GCTCTGGCCC
GACTTCGACC GGCGGCACTT CTGGCAGGCC TGCGAGATCT ACGCCCGCCG GGACCGTCGC
TACGGGGGAG CCGAACCCAA CCCGGTGGGG CCGCCGCAGT CCGCTGCCGG AGCGCAGGGG
CAGGACTGA
|
|---|
| Protein sequence | MSPKTVFSTD THREPIPPQP HPSGARPPQL PRELIPRHVA IVMDGNGRWA KQRGLPRTEG
HKAGESSLFD VIEGALELGV PYLSAYAFST ENWKRSPDEV RFLMGFNRDV IRRRRDELHA
RGVRVRWAGR PGRLWKSVIK ELTEAEELTK HNTKLTLQFC VNYGGRAEIA DAAAALARDV
AAGRLSPNRV TEATLARYLY HPDIPDVDLF IRSSGEQRLS NFLLWQSSYA EFVFLDTLWP
DFDRRHFWQA CEIYARRDRR YGGAEPNPVG PPQSAAGAQG QD
|
|---|
| |