| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0849 |
|---|
| Symbol | |
|---|
| ID | 3579631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 1002612 |
|---|
| End bp | 1003442 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637684542 |
|---|
| Product | regulatory proteins, IclR |
|---|
| Protein accession | YP_288910 |
|---|
| Protein GI | 72161253 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGT CACAGACAGC GACCGGTGAC GCCGGACTCG ACGGCATGAA CGGGACCACC
GTCACCGCGG GCAAACGGGA ACGCTCAGGT GGCGTGCAGT CCCTTGACCG CGCGTTCTGT
CTGCTCGAAA TCATGGCCGA GGCGGGCGGG GAGACCTCGC TCAGCGAACT CGCGCAGTCG
TCCGGGCTGC CCCTGCCCAC CATCCACCGC ATCGTGCGGT CCCTGGTCAG CAACGGCTAC
GTGCGGCAAC TGCCGTCCCG CCGCTACGCT CTCGGCCCCC GTCTCATCGG CCTCGGAGAG
AGCGCGTCCC GCCTGCTCGG CGCCTGGGCC CGCCCGCACC TCGCTCGCCT CGTCGACGAG
CTCGGCGAGA CCGCCAACCT GGCCATGCTC GACGGCGACC AGGTCGTCTA CGTCGCCCAA
GTGCCCTCCG CGCACGCCAT GCGCATGTTC ACCGAAGTGG GACGCAGGGT GCTGCCGCAC
TCGGCGGGCG TCGGCAAAGC GCTCCTCGCC CAGCTCCCCG ACGACGAAGC CCTGGCCATC
GTCCGCCGCA CCGGGATGCC CGCGGCCACC GACCGCACCA TCACCACCCC GGACGAGTTC
GCGGCCGAAC TGGCCCGTAT CCGCAGCCGC GGCTACGCCA TCGACGACGG CGAACAGGAA
GTCGGCGTGC GCTGCCTTGC CGTGCCGGTC GTCGGCGGCC CGGCGATGAT GGCCATCTCC
ATCTCCGGCC CCGAGTCCAG GATGACCTGG GATTTCGTGG CCAAAGCCGC TCCCGTGGTC
CGGGAGGTCG CCCGCGAACT CGCCGACGAC CTCAACAACC AGGCGCGGTG A
|
|---|
| Protein sequence | MTTSQTATGD AGLDGMNGTT VTAGKRERSG GVQSLDRAFC LLEIMAEAGG ETSLSELAQS
SGLPLPTIHR IVRSLVSNGY VRQLPSRRYA LGPRLIGLGE SASRLLGAWA RPHLARLVDE
LGETANLAML DGDQVVYVAQ VPSAHAMRMF TEVGRRVLPH SAGVGKALLA QLPDDEALAI
VRRTGMPAAT DRTITTPDEF AAELARIRSR GYAIDDGEQE VGVRCLAVPV VGGPAMMAIS
ISGPESRMTW DFVAKAAPVV REVARELADD LNNQAR
|
|---|
| |