| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0842 |
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| Symbol | |
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| ID | 3579411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 996968 |
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| End bp | 997498 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637684535 |
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| Product | RNA polymerase ECF-subfamily sigma factor |
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| Protein accession | YP_288903 |
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| Protein GI | 72161246 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.786617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGTGG AAGCGCCCGC GGCTACGGTG TCGGCCCGGT GGGATGCCGA CCAAGCGGTG
ACACAGCTCT ACTCGGACCA CTACCGCCCT TTGGTGCGAC TCGCTGCCCT CCTCGTTCGC
GATGTCGCCA CTGCCGAAGA AGTCGTACAG GACGCGTTCG TCGCCATGCA CGGGGCGTGG
CGGCGGCTCC GCGACCCCAA CAAAGCGCTT TCCTATCTGC GGCAAGCGGT GGTCAACAAA
GCCCGGTCGG TCCTGCGGCA CCGAGCCGTT GTCGAGAAGC ACGCACCCAA GGCGCTTCCC
GACGCCCCCA GTGCTGAGCA CGGTGCACTT AACGAACTGG AGCGCGCCGA GGTGGTCAAC
GCGCTGCGCG CGTTACCGAC GCGGCAGCGG GAGGCCATCG TCCTGCGGTA CTACGGAGAC
CTCTCCGAAG CTCAGATCGC CGACGCCATG GGCATCAGCC GTGGCGCGGT GAAGAGCCAC
ACGGCACGCG GTATCTCCAC GCTCCGCAAG CTCCTGGAGC AGACGAAATG A
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| Protein sequence | MVVEAPAATV SARWDADQAV TQLYSDHYRP LVRLAALLVR DVATAEEVVQ DAFVAMHGAW
RRLRDPNKAL SYLRQAVVNK ARSVLRHRAV VEKHAPKALP DAPSAEHGAL NELERAEVVN
ALRALPTRQR EAIVLRYYGD LSEAQIADAM GISRGAVKSH TARGISTLRK LLEQTK
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