Gene Tfu_0829 details

Gene Information

• Locus tag: Tfu_0829
• ID: 3579398
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 981364
• End bp: 983208
• Gene Length: 1845 bp
• Protein Length: 614 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637684522
• Product: GTP-binding protein LepA
• Protein accession: YP_288890
• Protein GI: 72161233
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0481] Membrane GTPase LepA
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01393] GTP-binding protein LepA

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCACAGC CAACTCGGAC CGATCCCGCG CTGATTCGGA ACTTCTGCAT CATCGCGCAC 
ATCGACCATG GCAAGTCGAC ACTGGCCGAC CGCATGCTGC AACTGACCGG CGTGGTTGAG 
GAACGCCAGA TGCGGGCCCA GTACCTCGAC CGCATGGACA TCGAACGCGA GCGTGGCATC 
ACCATCAAGT CGCAGGCGGT GCGACTGCCT TTTACCGCGC TCGACGATGT GACCTACATC 
CTCAACCTCA TCGACACCCC GGGGCACGTG GACTTCAGCT ATGAGGTCTC CCGGTCGCTG 
GCGGCCTGTG AAGGCGCGAT CCTGCTGGTC GATGCGGCCC AGGGCATCGA GGCCCAGACT 
CTGGCCAACC TGTACATGGC GCTGGAGCAC GATCTCACGA TCATCCCGGT CCTCAACAAG 
ATCGACCTGC CCGCGGCCCA GCCGGAGAAG TACGCCGCGG AGCTCGCCGG GATCATCGGC 
TGCGAGCCGT CGGACGTGCT GCGGGTGAGC GCCAAGACCG GTGAGGGTGT CGAGGAGCTG 
CTCAACGAGA TCGTGGCTCG CATCCCCCCG CCGGTGGGCA ATGCGGACGG GCCCGCCCGC 
GCGCTGATCT TCGACTCCGT CTACGACACC TACCGGGGTG TGGTCACCTA CGTGCGGGTG 
GTCGACGGGC AGATCACCAA CCGGGAACGC ATCCAGATGA TGTCGACCGG GGCCACCCAC 
GAAATGCTGG AGGTCGGGGT GATCTCCCCC GAGCCCACCA AGGTGGACTC CCTCGGGGTG 
GGCGAGGTCG GCTACCTCAT CACCGGGGTG AAGGATGTGC GCCAGTCCCG GGTCGGGGAC 
ACGATCACGT CGGCGGCCGC TCCCGCCGCG GAGGTCCTGC CCGGCTACCG CGACCCCAAG 
CCGATGGTGT TCTCCGGGCT GTACCCGATC GACGGCACCG ACTACCCTGT GCTGCGGGAC 
GCGTTGGAGA AGCTCCAGCT CAACGACGCC GCGCTGGTGT TCGAACCGGA GACGTCCGCC 
GCGCTCGGCT TCGGGTTCCG CTGCGGTTTC CTGGGGCTGC TGCACTTGGA GATCACCCGG 
GACCGGTTGG AGCGGGAGTT CGATCTGGCG CTCATCTCGA CCGCCCCCAA CGTGGTCTAC 
CGCGTCCGTA TGGAGGACGG CACCGAGCAC ACGGTGACCA ACCCCAGCGA GTTCCCGTCG 
GGCAAGATCG CGGAGATCCG CGAGCCGGTG GTGAAGGCGA CCGTGCTGAC CCCCTCCGAC 
TATGTCGGCC CGATCATGGA GCTGTGCCAG GGGCGGCGCG GCGTCTTGGA CGGGATGGAG 
TACCTGTCCG AGGACCGGGT GGAGATGCGG TACACGCTGC CGCTCGCCGA GATCGTCTTC 
GACTTCTTCG ACCAGCTCAA GTCCCGCACC AAGGGGTACG CCTCCTTGGA CTACGAGCCG 
TCCGGGGAGC AGGCCGCCGA CCTGGTGAAG GTGGACATCC TGCTGCAGGG GCAGGTGGTG 
GACGCGTTCT CCGCGATCGT GCACCGCGAC AACGCCTACT CCTACGGTGC GGAGATGACG 
AAGAAGCTGC GGGAACTCAT CCCCCGGCAG CAGTTCGAGG TGCCGATCCA GGCCGCGATC 
GGTTCCCGGG TCATCGCCCG GGAGAATATC CGCGCGCTCC GCAAGGACGT GCTCGCCAAG 
TGCTACGGCG GTGACATCAG CCGGAAGCGC AAGCTGCTGG AGAAGCAGAA GGAAGGCAAG 
AAGCGCATGA AGATGGTGGG CCGCGTCGAA GTGCCGCAGG AGGCGTTCAT TTCGGCACTG 
TCCACCGAGA GCAGCGGCGA AGGCAAGGAC GGCAAGAAGA AGTAA 

 

Protein sequence

MPQPTRTDPA LIRNFCIIAH IDHGKSTLAD RMLQLTGVVE ERQMRAQYLD RMDIERERGI 
TIKSQAVRLP FTALDDVTYI LNLIDTPGHV DFSYEVSRSL AACEGAILLV DAAQGIEAQT 
LANLYMALEH DLTIIPVLNK IDLPAAQPEK YAAELAGIIG CEPSDVLRVS AKTGEGVEEL 
LNEIVARIPP PVGNADGPAR ALIFDSVYDT YRGVVTYVRV VDGQITNRER IQMMSTGATH 
EMLEVGVISP EPTKVDSLGV GEVGYLITGV KDVRQSRVGD TITSAAAPAA EVLPGYRDPK 
PMVFSGLYPI DGTDYPVLRD ALEKLQLNDA ALVFEPETSA ALGFGFRCGF LGLLHLEITR 
DRLEREFDLA LISTAPNVVY RVRMEDGTEH TVTNPSEFPS GKIAEIREPV VKATVLTPSD 
YVGPIMELCQ GRRGVLDGME YLSEDRVEMR YTLPLAEIVF DFFDQLKSRT KGYASLDYEP 
SGEQAADLVK VDILLQGQVV DAFSAIVHRD NAYSYGAEMT KKLRELIPRQ QFEVPIQAAI 
GSRVIARENI RALRKDVLAK CYGGDISRKR KLLEKQKEGK KRMKMVGRVE VPQEAFISAL 
STESSGEGKD GKKK