| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0826 |
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| Symbol | |
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| ID | 3579705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 978482 |
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| End bp | 979549 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637684519 |
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| Product | helix-hairpin-helix DNA-binding, class 1 |
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| Protein accession | YP_288887 |
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| Protein GI | 72161230 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0217462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGAC ACACTGCTCC TGAGCCCGCT GCCCCGGCAG CGCAGCAGCC GTCTCCCCTG
CCGTCGTCTG AGGCCGCCTT GCCTGCCGAG TGGCGGGCAG CGGACGACGG GGACCCGACC
CCACTGGACT TCACTGTTCC TCCCCCGCCC TATGCCGTAG CCGACACGGT CCGCTCCCCG
GTGCCCGTGC TTCCCGCGCC ACGGCGTCCC CCGGCTCCCG AGGTGGGGAG GGACGAGGAT
GCGGCAGAGC GCCCTGCCCG GGCGGGCCGC GGTGCCCGTC CGGCCCCGCC CGCCGCACCT
CAGCCGGACC GCGGCACGGG TCGGAACGAC GGTTCGGCTC CCGCTCCCCC GCCCGGGTAT
GTGCGCATCC CGCCGCTCCC CGACCCGGCG GAGCGGCGGC TGCCTGCCCC GCTGGCGGCC
CTTGTGGACC GCTGGAGGGG TGTCTCAGTG GAGCTGCGGC CCCGCGTGAC CCTGTCCGGG
GTGGCGGCGC TCGCCCTCGT GTGCCTGCTG GCCGCGGGGG TCACCGGCTG GTTCATGCTC
AACGCCCGTC CCGCGTCCGC GCCCGCGCCG CCGCAGGAGG CCGTCCCGTC CGGTCCTCAT
CCGTCCCCGG CGGCGGAAGC GAGTCCTGCC GGCACGGTCG TGGTCCACGT GGGCGGTGAC
GTGGTCTCCC CGGGGATCGT GACCCTGCCC GCCGGGTCCC GGGTGGCCGA TGCTCTCGAC
GCGGCGGGCG GCCCGCGCCC GGATGCGGAT CTAGGGTTCC TCAACCTGGC CCGTCCCCTC
GTCGACGGCG AGCAGATCCT CGTTGGGGTC ACCCCGTCGC CCATGGCCGG GGAAGGCGAG
GGTCCGGGCC TGCCCGCCGG GGACGGGCGG ATCGACCTCA ACACCGCTAC CGCCGACCAG
TTGCAGACCC TGCCGGGAAT CGGCCCGGTG CTGGCCCAGC GCATCATCGA CCACCGCGCG
TCCATCGGCG GTTTCACCTC GGTGGAGCAG CTCCACGACG TCACCGGTAT CGGGGACCGC
CGGTTCGCGG AGCTGCGCGA CCTGGTCTAC GTCGGCGGTG CCCCGTGA
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| Protein sequence | MARHTAPEPA APAAQQPSPL PSSEAALPAE WRAADDGDPT PLDFTVPPPP YAVADTVRSP
VPVLPAPRRP PAPEVGRDED AAERPARAGR GARPAPPAAP QPDRGTGRND GSAPAPPPGY
VRIPPLPDPA ERRLPAPLAA LVDRWRGVSV ELRPRVTLSG VAALALVCLL AAGVTGWFML
NARPASAPAP PQEAVPSGPH PSPAAEASPA GTVVVHVGGD VVSPGIVTLP AGSRVADALD
AAGGPRPDAD LGFLNLARPL VDGEQILVGV TPSPMAGEGE GPGLPAGDGR IDLNTATADQ
LQTLPGIGPV LAQRIIDHRA SIGGFTSVEQ LHDVTGIGDR RFAELRDLVY VGGAP
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