| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0818 |
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| Symbol | |
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| ID | 3579697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 966707 |
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| End bp | 968413 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637684511 |
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| Product | peptide/nickel transport system substrate-binding protein |
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| Protein accession | YP_288879 |
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| Protein GI | 72161222 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGAACAG GGAAACGGCG TGCGATTTCG GTGGGAGCAT TCGTGCTCAC CCTGACCGCC
GCGCTGGCAG GCTGCCAGGC GGAAGTGGAC CACAGGCAGG CAGCCCCGGA ACCCGCAACA
GCCGCAATCA ACGCCGTAGA CCGCGCGCTC GTAGCCGACG GCGGCACCTT GACCTGGGGG
ATCAACGAGT TCCCCACCCA GTGGAACCCC CACCATCAGG CCGGAAACCT CGCCGCCGTG
CACACGGTCC TCGAAGCGCT GCTGCCCATC CCGTTCCGGG TCGATGAACG GGGTGAAGCC
CACCCCAACC CCGACTATGT GATCGACGTG TCGGTCACCA CCGAACCCGA ACAGGTCGTC
ACCCTCACCC TCAACCCGGA GGCTGCCTGG TCCACCGGGG ACCCCATCAC CTGGCGCGAC
TACGCGGCCA TGGCCGAAGC CTTGTCGGGA AGCAACCCGG AGTATCAGGC GCTCGGCACT
GTCGGCTACG ACCGGATCGC TGAAGTACGC AAGGGGAAGA ACAAGTACCA GGTCGTCATC
GTCTTCGAAC AGCCGTTCTC CGAGTATCCG GCGCTGTTCT CGCCCCTGCT CCCCGAGGAG
TACACCGCGG ACCCGGAATC CTTCAACACC GGATACCTCG AGCAGATCCC GGTCACCGCG
GGACCGTTCG ACGTGGCGGA GCTCGACCTC GTCGCCCAGA CCATCACCCT GGAGCGCAAC
GCGGACTGGT GGGGTGACCC GGCCCGGCTC GAGGCGATCA TCTTCCGCAC GCTGGCCCCC
GACGCGCTGG ACGCGGCCTT CCTCGACGGC AGCATCGACC TGTACGCGCT CTCCCTCGAC
TCCGGGTCCT ATGAGCGGAT CCGCTCCGCA CCGGGCACGG AGATCCGGGC TGCACTGGGC
GCCGACTACC GGCACATCAC CCTCAACGGG CAGACCCCGA TCCTCAAGGA CGTGGACGTC
CGCCACGCGA TCTTCCTGGG GATCAACCGC GAAGTGCTCG CCACAGCGGC GCTGGGCACC
CTGGGATGGG AGCCGCGGGT GCTCAACAAC CGGTTCCTCA TGCCCGAACA GCCCGGCTAT
GCCGACAACA GCGGCGAGTG GGGGAAGTAC GACCCCGACC GGGCCGCGCA ACTGCTGGAG
GAAGCAGGCT GGACCGCGGC CCAGCCCGGC GAGGTGCGCA CTCGTGACGG CAAGCCGCTG
ACGCTGCGGT TCATCGTCCC GCAGGGGTAT GCGCCGGCGT GGGAGGAAGC CGAACTGGTG
CAGTCGATGC TCGCCGAGAT CGGGGTGGAC ATCAAGATCA CGAGTGTGCC GGGCAACCAG
TTGTTCAGCA AATACGTCCA GCCCGGCAAC TACGACCTGG TCGCTTTCGT CAACAGCGGC
AGGGGGTTCC CGGTCTTCGA CTCGCTGCAC CAGTGGCTCG ACGCGGTCGA CGACGCCGAC
GGGAAGCCGC AGTGGCGGAC CAATGTCGGC CGGATCGGCT CCCCCGAGGT GGACCAGGCC
CTGTACGGCG CGCTCGAGGC CCTCGACCGC GGCACCGCAA TCGAACAGCT CAACAAAGCC
GACCGGCTGC TGTGGGAGCT CGGCCACACC CTGCCCCTCT ACCAGCGGCC GCAGATCTAC
GCGGTCCGCG ACACCCTGGC CAATGTGGGG GCTCCCGGGC TGGGCACGCT GGACTACGCC
GACATCGGCT ACGTGGTGCA GGAATGA
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| Protein sequence | MRTGKRRAIS VGAFVLTLTA ALAGCQAEVD HRQAAPEPAT AAINAVDRAL VADGGTLTWG
INEFPTQWNP HHQAGNLAAV HTVLEALLPI PFRVDERGEA HPNPDYVIDV SVTTEPEQVV
TLTLNPEAAW STGDPITWRD YAAMAEALSG SNPEYQALGT VGYDRIAEVR KGKNKYQVVI
VFEQPFSEYP ALFSPLLPEE YTADPESFNT GYLEQIPVTA GPFDVAELDL VAQTITLERN
ADWWGDPARL EAIIFRTLAP DALDAAFLDG SIDLYALSLD SGSYERIRSA PGTEIRAALG
ADYRHITLNG QTPILKDVDV RHAIFLGINR EVLATAALGT LGWEPRVLNN RFLMPEQPGY
ADNSGEWGKY DPDRAAQLLE EAGWTAAQPG EVRTRDGKPL TLRFIVPQGY APAWEEAELV
QSMLAEIGVD IKITSVPGNQ LFSKYVQPGN YDLVAFVNSG RGFPVFDSLH QWLDAVDDAD
GKPQWRTNVG RIGSPEVDQA LYGALEALDR GTAIEQLNKA DRLLWELGHT LPLYQRPQIY
AVRDTLANVG APGLGTLDYA DIGYVVQE
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