| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0815 |
|---|
| Symbol | miaA |
|---|
| ID | 3579694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 963662 |
|---|
| End bp | 964621 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637684508 |
|---|
| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| Protein accession | YP_288876 |
|---|
| Protein GI | 72161219 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAG TGATCGCGGT CGTCGGACCG ACCGCAGTGG GCAAGTCTGA CCTCAGCGTC
GCCCTGGCGC TGCGCCTGAC CGAGCACGGC CTCCCCGCCG AAATCATCAA CGCCGACTCC
ATGCAGCTCT ACCAGGGCAT GGACATCGGC ACGGCCAAGC TCACCCCGGA GGAACGGCGC
GGCGTCCCCC ACCACTTGCT CGACGTCTGG GAGGTGACCC AGACCGCGAA CGTGGCCGAC
TACCAGCGCA TGGCCCGCGC GGTCATCGAC GACCTCCACG CCGCAGGCCG GGTGCCCGTC
CTCGTGGGCG GCTCTGGACT GTACGTGCGG GCCGCCTTGG ACGAACTCGA CTTCCCCGGC
ACCGACCCGA AGGTCCGGGC CCGTTTGGAG GCTGAACTCG CCGAACAGGG GCCGCTCGCC
CTGCATGCCC GGCTGGCGCG CCTCGACCCT GAGGCGGCCC GGGCGATCCT GCCCACCAAC
GGACGGCGTA TCGTGCGCGC CCTGGAAGTC ATCGAGATCA CCGGGGGACC GTTCACCGCG
ACCTTGCCCG ACCACGTCTC CCGCTACCCG TGCGTGCAGA TCGGGTTGAC TGCGCCCCGC
CCGGAACTGG ACGAGCGGAT CGCACTCCGC GTGGACCGCA TGTGGGAGGC GGGCCTGGTG
GACGAGGTGC GTGCCCTGGA GAAGGCGGGG CTGCGCGACG GGTTCACCGC CTCCCGGGCC
CTGGGCTACG CCCAGATTCT CCGCTTCCTG GCCGGGGAGT GCACGGAAGA GGAGGCCAAG
GAGGAGACCG TACGGGCTAC CCGGCGGTTC GCCCGCCGCC AGGAATCGTG GTTCCGCCGT
GATCCGCGGG TGCACTGGCT GCCCTACGAC GCCCCCGACC TGGTGGATCG GGCGTTCGCG
CTGGTCTGCG AGCACTCTGA CCTCTGCTTC CGGTCAGCCA CGCGCGACGA GCAGTCCTGA
|
|---|
| Protein sequence | MSTVIAVVGP TAVGKSDLSV ALALRLTEHG LPAEIINADS MQLYQGMDIG TAKLTPEERR
GVPHHLLDVW EVTQTANVAD YQRMARAVID DLHAAGRVPV LVGGSGLYVR AALDELDFPG
TDPKVRARLE AELAEQGPLA LHARLARLDP EAARAILPTN GRRIVRALEV IEITGGPFTA
TLPDHVSRYP CVQIGLTAPR PELDERIALR VDRMWEAGLV DEVRALEKAG LRDGFTASRA
LGYAQILRFL AGECTEEEAK EETVRATRRF ARRQESWFRR DPRVHWLPYD APDLVDRAFA
LVCEHSDLCF RSATRDEQS
|
|---|
| |