Gene Tfu_0806 details

Gene Information

• Locus tag: Tfu_0806
• ID: 3579877
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: -
• Start bp: 952332
• End bp: 954317
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637684499
• Product: putative acyl-peptide hydrolase
• Protein accession: YP_288867
• Protein GI: 72161210
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.0875582
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGAAC GCGTGATCCT GCCCTACGGG AGCTGGTCCT CACCCATCAC CGCGGCCGAC 
ATCGCCAAAG GTGCTCTCCG TCTCGGTTTC CCCTCTGTCG TCGCCGATGA GATGTGGTGG 
GAGGAATCCC GACCCGAGGA AGGCGGCCGC ACCACCGTCA TGCACCGCGC TGCTGACGGC 
ACCGTTACCG AACTCCTGCC CGCCCCGTGG AATGCGCGGA CCCGGGTCCA CGAGTATGGA 
GGCCGCTCCT ACCTGCCTGT GCCCCGCCGC GACGACAAGG CGATCACCCG CTGGGGCATC 
GTCTTCGCCA ACTTCTCCGA CCAGCGCCTC TACCTGTTGG AGAAAGGCTC CCGCGAGCCC 
CGCCCGCTCA CCCCGGAACC GGAGAGCCCG GGTGCGCTCC GCTACGCCGA CTTCGTGCTC 
TCCCCCGACC GCAAGCACCT CATCTGTGTG CGGGAAAGCC ACGACGGCAC CACCGTCACC 
CGCGCCATCG TCTCCGTGCC CCTGTCGGGG CGGGCCGCCA CCAACCCGTC GGCGGTCCGC 
GTCCTGGTGA CCGGGGCCGA CTTCTTCGCC TCCCCGGTGC CGTCACCGGA CGGGACCAAA 
CTCGCCTGGA TCTCCTGGAG CCACCCACGC ATGCCGTGGC AGGGCACCCA GTTGCGGGTC 
GCCGACATTC CGGAGACCGG GCCGATCACT ACTTCGCATC CGCTGCGCGG CGGGTTGAAA 
GAGTCCGTGC TGCACCCGCA GTGGCGGGAC AACGAGACCC TCTGCTTCGT GTCCGACTGG 
TCCGGCTGGT GGAACCTGTA CGAGACGCGG CTCTACGGGC AGGCGATGGC GCTCTTCCCG 
GACGAAGCCG AGTTCACGCC GCCGCCATGG CAGTTGGGGA TCACCCCCTA CTGCGTGCTC 
GACGACGGGC AGCTCATCAC GCTCTACGGC CACGCGGACC TGGGGGTCGG CCGCTACGAT 
CCCCACACCG CCGACCTCAC CCCGCTCGCT TCGTCGTTCA CAAGCTGGCA CACCCTGGCC 
AGTGACGGGA AAACCGTGGT CGGTATCGCC GCCTCCCCCA CCGAGCCGAC CAGTCTCGTG 
CGGCTCAACC CGGAGAACGG GGCGACGACC GTGCTCCGCC GCTCGCTCAC CGAAACCCCC 
ACCATCGGGT ACCTGCCCAA ACCCCGTACC ACGTCCCTGT CCGGCCGCTA CGGCACCACC 
GTGCACGCCA ACGTCTACCC GCCCACCAAC CCCGAAATGG AAGGGGAAGG GCCCGCCCCC 
TACGTCGTCT GGGTGCACGG CGGCCCCACC GGAGCTGCCA CCACCGGGCT CGACCTGCAC 
AAGGCCTACT TCACCAGCCG CGGGATCGGC ATCATCGACG TCAACTACGG CGGATCCACC 
GGGTACGGCC GCGCCTACCG GGAACGCCTC GACGGCCAGT GGGGGGTCGT CGACGTGGAA 
GACGTGGTCG CCGCAGCCCA GAGCCTCGTC GACCAGGGCC TCGCCGACCC CGACCGGCTG 
GCGATCCGCG GGGGAAGCGC AGGAGGGTTC ACCACTCTGC TCGCACTCAC CCAAGACGTG 
TTCGCCTGCG GCGTCTCCTA CTACGGCGTC ACCGACCTGC TTCGGCTCGT GCAGGAAACC 
CACGACTTCG AATCCCGCTA CCTCGACACC CTCATCGGTG TCCTCTCCGG TTACAGCGCC 
ACCTACCAGG AGCGCTCCCC GATCAACCGG GTCGCGGAGA TCAACGTTCC CGTGCTGCTC 
CTGCAAGGCG CGGACGACCC TGTCGTCCCA CCGGAGCAGG CCCGGGAATT CGCCGCTGTC 
CTCAAGGAAC GCGGTGTCCC CCACGTCCTC GTGGAGTTCG AGAACGAAAG CCACGGTTTC 
CGCAAGCCCG ACACTGTCGC CACCGCGTTG GAGAAGGAGC TTGCCTTCTA CTGCAAAGTG 
TTCTTCGGGT TCACACCGCC GGGGGTGCCC CCGATCGACC TCGACCTGTC CGCCCCCACC 
GAATAG 

 

Protein sequence

MNERVILPYG SWSSPITAAD IAKGALRLGF PSVVADEMWW EESRPEEGGR TTVMHRAADG 
TVTELLPAPW NARTRVHEYG GRSYLPVPRR DDKAITRWGI VFANFSDQRL YLLEKGSREP 
RPLTPEPESP GALRYADFVL SPDRKHLICV RESHDGTTVT RAIVSVPLSG RAATNPSAVR 
VLVTGADFFA SPVPSPDGTK LAWISWSHPR MPWQGTQLRV ADIPETGPIT TSHPLRGGLK 
ESVLHPQWRD NETLCFVSDW SGWWNLYETR LYGQAMALFP DEAEFTPPPW QLGITPYCVL 
DDGQLITLYG HADLGVGRYD PHTADLTPLA SSFTSWHTLA SDGKTVVGIA ASPTEPTSLV 
RLNPENGATT VLRRSLTETP TIGYLPKPRT TSLSGRYGTT VHANVYPPTN PEMEGEGPAP 
YVVWVHGGPT GAATTGLDLH KAYFTSRGIG IIDVNYGGST GYGRAYRERL DGQWGVVDVE 
DVVAAAQSLV DQGLADPDRL AIRGGSAGGF TTLLALTQDV FACGVSYYGV TDLLRLVQET 
HDFESRYLDT LIGVLSGYSA TYQERSPINR VAEINVPVLL LQGADDPVVP PEQAREFAAV 
LKERGVPHVL VEFENESHGF RKPDTVATAL EKELAFYCKV FFGFTPPGVP PIDLDLSAPT 
E