Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0791 |
Symbol | dapA |
ID | 3579862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 934691 |
End bp | 935668 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637684484 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_288852 |
Protein GI | 72161195 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0269832 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGGCA GTACGACGCC GAACGCGCCC TTCGGCCAGA TGTTGACCGC GATGATCACC CCCATGCTCG ACAATGGGGA GGTGGACTAC GACGGGGTGG CCCGCCTCGC GACCTACCTC GTCGATGAGC AGCGCAACGA CGGCCTCATC GTCAACGGAA CCACCGGAGA GTCCGCCACC ACCAGCGATG AGGAGAAGGA GCGCATCCTC CGCACCGTGA TCGACGCGGT CGGCGACCGC GCCACCATCG TTGCCGGAGC GGGCAGCAAC GACACCAGGC ACAGTATTGA ACTCGCGCGG ACCGCGGAAC GCGCCGGAGC AGACGGCCTG CTGCTCGTCA CCCCCTACTA CAACCGGCCG CCCCAAGAAG GCCTGCTGCG GCACTTCACG GCCATTGCCG ACGCCACAGG GCTGCCGATC ATGCTCTACG ACATTCCTGG CCGCACAGGC ACGCCGATCG ACTCCGAAAC CCTGGTCCGG CTCGCCGAGC ACCCCCGCAT CGTCGCCAAC AAGGACGCCA AAGACGACCT CGGCGCCAGC TCGTGGGTGA TGTCCCGCAC CGACCTCGCC TACTACAGCG GCAGCGACAT GCTCAACCTG CCGCTGCTGT CCATCGGCGC CGCGGGCTTC GTCAGCGTGG TCGGCCATGT CGTCGGCTCC GAACTGCACG ACATGATCGA CGCCTACCGG GCCGGGGACG TGGCCCGGGC TTTGGACATC CACCGCCGCC TGATCCCCGT CTACCGGGGC ATGTTCCGCA CCCAGGGAGT CATCACCACT AAGGCGGTGC TCGCCATGTT CGGGCTGCCC GCCGGAGTGG TCCGCGCCCC CCTGCTCGAC GCGTCCCCCG AACTCAAAGA GCTGCTCCGC GAAGACCTCG CCATGGCCGG GGTGAAGGGC CCCACTGGCC TTGCCTCCGC TCACGAGGAC GCGGCCAGCG GGAGGGAAGC GGAACGACTC ACGGAGGGGA CCGCATGA
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Protein sequence | MVGSTTPNAP FGQMLTAMIT PMLDNGEVDY DGVARLATYL VDEQRNDGLI VNGTTGESAT TSDEEKERIL RTVIDAVGDR ATIVAGAGSN DTRHSIELAR TAERAGADGL LLVTPYYNRP PQEGLLRHFT AIADATGLPI MLYDIPGRTG TPIDSETLVR LAEHPRIVAN KDAKDDLGAS SWVMSRTDLA YYSGSDMLNL PLLSIGAAGF VSVVGHVVGS ELHDMIDAYR AGDVARALDI HRRLIPVYRG MFRTQGVITT KAVLAMFGLP AGVVRAPLLD ASPELKELLR EDLAMAGVKG PTGLASAHED AASGREAERL TEGTA
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