Gene Tfu_0791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0791 
SymboldapA 
ID3579862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp934691 
End bp935668 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content68% 
IMG OID637684484 
Productdihydrodipicolinate synthase 
Protein accessionYP_288852 
Protein GI72161195 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0269832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGGCA GTACGACGCC GAACGCGCCC TTCGGCCAGA TGTTGACCGC GATGATCACC 
CCCATGCTCG ACAATGGGGA GGTGGACTAC GACGGGGTGG CCCGCCTCGC GACCTACCTC
GTCGATGAGC AGCGCAACGA CGGCCTCATC GTCAACGGAA CCACCGGAGA GTCCGCCACC
ACCAGCGATG AGGAGAAGGA GCGCATCCTC CGCACCGTGA TCGACGCGGT CGGCGACCGC
GCCACCATCG TTGCCGGAGC GGGCAGCAAC GACACCAGGC ACAGTATTGA ACTCGCGCGG
ACCGCGGAAC GCGCCGGAGC AGACGGCCTG CTGCTCGTCA CCCCCTACTA CAACCGGCCG
CCCCAAGAAG GCCTGCTGCG GCACTTCACG GCCATTGCCG ACGCCACAGG GCTGCCGATC
ATGCTCTACG ACATTCCTGG CCGCACAGGC ACGCCGATCG ACTCCGAAAC CCTGGTCCGG
CTCGCCGAGC ACCCCCGCAT CGTCGCCAAC AAGGACGCCA AAGACGACCT CGGCGCCAGC
TCGTGGGTGA TGTCCCGCAC CGACCTCGCC TACTACAGCG GCAGCGACAT GCTCAACCTG
CCGCTGCTGT CCATCGGCGC CGCGGGCTTC GTCAGCGTGG TCGGCCATGT CGTCGGCTCC
GAACTGCACG ACATGATCGA CGCCTACCGG GCCGGGGACG TGGCCCGGGC TTTGGACATC
CACCGCCGCC TGATCCCCGT CTACCGGGGC ATGTTCCGCA CCCAGGGAGT CATCACCACT
AAGGCGGTGC TCGCCATGTT CGGGCTGCCC GCCGGAGTGG TCCGCGCCCC CCTGCTCGAC
GCGTCCCCCG AACTCAAAGA GCTGCTCCGC GAAGACCTCG CCATGGCCGG GGTGAAGGGC
CCCACTGGCC TTGCCTCCGC TCACGAGGAC GCGGCCAGCG GGAGGGAAGC GGAACGACTC
ACGGAGGGGA CCGCATGA
 
Protein sequence
MVGSTTPNAP FGQMLTAMIT PMLDNGEVDY DGVARLATYL VDEQRNDGLI VNGTTGESAT 
TSDEEKERIL RTVIDAVGDR ATIVAGAGSN DTRHSIELAR TAERAGADGL LLVTPYYNRP
PQEGLLRHFT AIADATGLPI MLYDIPGRTG TPIDSETLVR LAEHPRIVAN KDAKDDLGAS
SWVMSRTDLA YYSGSDMLNL PLLSIGAAGF VSVVGHVVGS ELHDMIDAYR AGDVARALDI
HRRLIPVYRG MFRTQGVITT KAVLAMFGLP AGVVRAPLLD ASPELKELLR EDLAMAGVKG
PTGLASAHED AASGREAERL TEGTA